[MOBY-guts] biomoby commit
Gary Schiltz
gss at pub.open-bio.org
Mon Mar 21 21:42:02 UTC 2005
gss
Mon Mar 21 16:42:02 EST 2005
Update of /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot
In directory pub.open-bio.org:/tmp/cvs-serv9239/WebRoot
Modified Files:
index.html help.html
Log Message:
Misc
moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot index.html,1.5,1.6 help.html,1.3,1.4
===================================================================
RCS file: /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/index.html,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -r1.5 -r1.6
--- /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/index.html 2004/11/23 00:20:02 1.5
+++ /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/index.html 2005/03/21 21:42:01 1.6
@@ -3,118 +3,71 @@
<head>
<title>Semantic MOBY</title>
</head>
-<body>
-<center>
-<h1><span style="COLOR: rgb(51,204,0)"><i>Semantic</i> <span
- style="COLOR: blue">M<span style="COLOR: red">O<span
- style="COLOR: blue">B<span style="COLOR: red">Y</span></span></span></span></span></h1>
-</center>
-<center>
-<table width="100%" bgcolor="#ffcc66"
- align="center" border="1" cellpadding="2" cellspacing="0">
-<tr><td>
-<table width="100%" align="center" border="0" cellpadding="2" cellspacing="0">
- <tr align="center"><td>
- <b><big><a href="meeting">MOBY Autumn 2004 Meeting</a></big></b>
- </td></tr>
- <tr align="center"><td>
- <b><big>November 20-21 — Santa Fe, New Mexico</big></b>
- </td></tr>
- <tr align="center"><td>
- <b><big><a href="meeting/registration-form.html">Register Now!</a></big></b>
- </td></tr>
-</table>
-</td></tr>
-</table>
-</center>
<br>
+<body background="images/pinstripe.gif">
<center>
-</center>
-<font color="black"></font>
-<center>
-<form action="keyword-search">
+<form action="keyword-search"><IMG alt="" src="images/smoby-medium.gif"
+ align="middle" border="0"> <br><br><br>
<table border="0" cellpadding="2">
<tr>
- <td align="middle">Provider</td>
-
- <td align="middle">Subject</td>
-
- <td align="middle">Object</td>
+ <td align="middle"><font size="2">
+ <i>Service Provider</i> transforms …</font></td>
+ <td align="middle"><font size="2">
+ … from <i>Subject</i> …</font></td>
+ <td align="middle"><font size="2">
+ … to <i>Object</i></font></td>
</tr>
-
<tr>
<td><input size="35" name="provider"></td>
-
<td><input size="35" name="accepts"></td>
-
<td><input size="35" name="returns"></td>
</tr>
</table>
-<font color="black"><br>
-</font>
-
-<center><font color="black">Type any terms into the boxes above and
-press Search<br>
-(for example type 'hello' (without quotes) into the Provider field,<br>
-or to see all providers, type just an asterisk (*) into the<br>
-Provider field and leave the other fields blank)<br>
+<font face="sans-serif" size="2">
+<br>
+<!-- <input value="Search" type="submit" image="images/search.gif"> -->
+<input type="image" name="submit" alt="Search" src="images/search.gif">
+<br>
+<br>
+To find and engage services on the web, type any terms into the above
+boxes and press the Search button.
+<br>
+<br>
+<strong>
+Example: type "panel" in the Subject field and press Search to discover
+the CSHL HapMap service.
+</strong>
<br>
-<input value="Search" type="submit"></font></center>
</form>
-</center>
-<font color="black">
-<center><br>
-<A href="about.html">About Semantic MOBY</a> <A
- href="help.html" target=_blank>Help on Searching</a><br>
+<a href="about.html">About Semantic MOBY</A>
+<a href="help.html" target="_blank">Help on Searching</A>
+<br>
+<a href="developer/java-api">
+Developers: see the JavaDoc for the Semantic MOBY API! </a>
<br>
<br>
-</center>
-</font>
-<center>
-
<table border="0" cellpadding="2" width="65%">
<tr>
<td align="middle" valign="bottom" width="33%"><a
- href="http://www.cshl.edu" target="_blank"><IMG alt=CSHL
- src="images/cshl-logo.jpg" border=0></a></td>
-
+ href="http://www.cshl.edu" target="_blank"><IMG alt="CSHL"
+ src="images/cshl-logo.gif" border="0"></a></td>
<td align="middle" valign="bottom" width="33%"><a
- href="http://www.ncgr.org" target="_blank"><IMG alt=NCGR
- src="images/ncgr-logo.jpg" border=0></a></td>
-
+ href="http://www.ncgr.org" target="_blank"><IMG alt="NCGR"
+ src="images/ncgr-logo.gif" border="0"></a></td>
<td align="middle" valign="bottom" width="33%"><a
- href="http://www.nsf.gov" target="_blank"><IMG alt=NSF
- src="images/nsf-logo.jpg" border=0></a></td>
+ href="http://www.nsf.gov" target="_blank"><IMG alt="NSF"
+ src="images/nsf-logo.gif" border="0"></a></td>
</tr>
-
<tr>
<td align="middle" valign="top" width="33%"><a
href="http://www.cshl.edu" target="_blank">CSHL</a></td>
-
<td align="middle" valign="top" width="33%"><a
href="http://www.ncgr.org" target="_blank">NCGR</a></td>
-
<td align="middle" valign="top" width="33%"><a
href="http://www.nsf.gov" target="_blank">NSF</a></td>
</tr>
-
- <tr>
- <td></td>
- </tr>
</table>
</center>
-<font color="black">
-<center><br>
-</center>
-<!--
- <center>
- <table border="0" width="100%">
- <tr>
- <td align="center" style="background-color: yellow">
- Under Construction - Pardon the Dust</td>
- </tr>
- </table>
- </center>
- --></font>
+</font>
</body>
</html>
===================================================================
RCS file: /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/help.html,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/help.html 2004/07/21 22:35:25 1.3
+++ /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/help.html 2005/03/21 21:42:01 1.4
@@ -3,43 +3,44 @@
<title>Semantic MOBY Search Help</title>
</head>
<center>
+<img src="images/smoby-medium.gif"/>
<h1>
-<span style="color: rgb(51, 204, 0);"><i>Semantic</i>
-<span style="color: blue">M<span style="color: red">O<span style="color: blue">B<span style="color: red">Y
<span style="color: gray">Search Help
</h1>
</center>
+<body>
<font color="black" face="sans-serif">
Semantic MOBY maintains a searchable repository of descriptions of
-<i>providers</i> of services that are available on the web. At the heart
-of these descriptions is the notion that providers map one type
+<i>Service Providers</i> that are available on the web. At the heart
+of these descriptions is the notion that providers transform one type
of thing (the <i>Subject</i>) to another (the <i>Object</i>), or
vice versa.
<br><br>
-Providers, as well as subjects and objects, are
-classified using web-accessible definitions (ontologies), and these definitions
+Providers, as well as subjects and objects, are classified using
+web-accessible definitions (ontologies), and these definitions
have keywords associated with them. For example, the following shows
-a query for providers whose definitions include the keyword "hello":
+a query for providers whose subjects are members of any class that
+has the keyword "panel" associated with it:
<br><br>
<center>
-<img src="images/help1.png"/>.
+<img src="images/help1.gif"/>.
</center>
<br>
<u>Search hints</u>
<ul>
-<li>Keywords are not case sensitive, so <code>HELLO</code> means the
-same thing as <code>hello</code> as does <code>HeLlO</code>.
+<li>Keywords are not case sensitive, so <code>PANEL</code> means the
+same thing as <code>panel</code> as does <code>PaNeL</code>.
<br><br>
<li>The wildcard character (<code>*</code>) can be used at the end of a keyword
to match keywords that start with the characters before the wildcard.
-For example, <code>he*</code> will match <code>hello</code> as well
-as <code>help</code>.
+For example, <code>pan*</code> will match <code>panel</code> as well
+as <code>panini</code>.
<br><br>
<li>Multiple words enclosed in double quotes are considered to be a
single keyword. For example, the quoted string <code>"gene symbol"</code>
-is considered to be a single keyword composed of 11 characters, including a space.
-The wildcard character is interpreted literally (i.e. as the '<code>*</code>'
-character) if it appears within a quoted string.
+is considered to be a single keyword composed of 11 characters, including
+a space. The wildcard character is interpreted literally (i.e. as the
+'<code>*</code>' character) if it appears within a quoted string.
<br><br>
<li>Multiple keywords may be typed in one of the fields; this means to
search for <i>any</i> of the keywords in that field. For example,
@@ -50,7 +51,9 @@
match keywords for <i>all</i> the fields will match. For example,
typing <code>fat sugar</code> into the Subject field, and
<code>"weight gain"</code> into the Object field will search for
-providers that map either fat or sugar to weight gain.
+providers that map either <i>fat</i> or <i>sugar</i> to <i>weight gain</i>.
<br><br>
</ul>
+</font>
+</body>
</html>
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