[MOBY-guts] biomoby commit

[Yan Wong]

yanwong
Tue Apr 19 11:41:50 EDT 2005
Update of /home/repository/moby/moby-live/Python/tutorials/webservices
In directory pub.open-bio.org:/tmp/cvs-serv16275/tutorials/webservices

Modified Files:
	Clustalw.py bioMoby-Oracle.py 
Log Message:
Added a SQL invocator and Dispatcher
this should ease the build of DB based webservices

moby-live/Python/tutorials/webservices Clustalw.py,1.3,1.4 bioMoby-Oracle.py,1.1,1.2
===================================================================
RCS file: /home/repository/moby/moby-live/Python/tutorials/webservices/Clustalw.py,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Python/tutorials/webservices/Clustalw.py	2004/12/08 14:53:40	1.3
+++ /home/repository/moby/moby-live/Python/tutorials/webservices/Clustalw.py	2005/04/19 15:41:50	1.4
@@ -33,8 +33,9 @@
     
 def ClustalFormatter(results):
     def ClustalFormatter(results):
-    """Return the results in a MobyClustalAlnFormattedText object
-    """
+        """Return the results in a MobyClustalAlnFormattedText object
+    	"""
+    
     from bioMoby import MobyClustalAlnFormattedText
     
     return [MobyClustalAlnFormattedText(content=results)]

===================================================================
RCS file: /home/repository/moby/moby-live/Python/tutorials/webservices/bioMoby-Oracle.py,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Python/tutorials/webservices/bioMoby-Oracle.py	2005/01/18 13:22:58	1.1
+++ /home/repository/moby/moby-live/Python/tutorials/webservices/bioMoby-Oracle.py	2005/04/19 15:41:50	1.2
@@ -87,7 +87,7 @@
     
             mobyResults=[]
     
-            for aResult in resultset:
+            #for aResult in resultset:
                 #Format your results here, use Moby Objects here:
                 #Example:
                 
@@ -98,8 +98,8 @@
         return [("nameOfTheCollection",mobyResults)]
     except:
         #Something wrong occured, then return a error, normally, it should never happen...
-	sio=StringIO.StringIO()
-	traceback.print_exc(file=sio)
+        sio=StringIO.StringIO()
+        traceback.print_exc(file=sio)
 	
 	results['ERROR']=[MobyString(content=sio.getvalue())]