[MOBY-guts] biomoby commit
Eddie Kawas
kawas at pub.open-bio.org
Thu Apr 7 16:37:03 UTC 2005
kawas
Thu Apr 7 12:37:02 EDT 2005
Update of /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared
In directory pub.open-bio.org:/tmp/cvs-serv1723/org/biomoby/shared
Modified Files:
MobyDataSimpleInstance.java MobyData.java
MobyDataDateTime.java MobySecondaryData.java
MobyDataFloat.java MobyRelationship.java MobyService.java
MobyDataType.java MobyPrimaryDataSimple.java
MobyDataString.java MobyNativeService.java Central.java
MobyPrimaryDataSet.java MobyDataInt.java Utils.java
Added Files:
MobyObjectDecompositionImpl.java MobyObjectDecomposition.java
Log Message:
Okay, i am trying again ...
-----------------------
Adding the packages and files:
org.biomoby.client.rdf.*
org.biomoby.client.ui.*
org.biomoby.shared.mobyxml.*
org.biomoby.registry.properties.*
org.biomoby.registry.definitions.*
as well as some empty packages:
org.biomoby.client.exceptions
I have also removed various import statements in source files that were not needed.
Eddie
moby-live/Java/src/main/org/biomoby/shared MobyObjectDecompositionImpl.java,NONE,1.1 MobyObjectDecomposition.java,NONE,1.1 MobyDataSimpleInstance.java,1.6,1.7 MobyData.java,1.2,1.3 MobyDataDateTime.java,1.1,1.2 MobySecondaryData.java,1.1,1.2 MobyDataFloat.java,1.3,1.4 MobyRelationship.java,1.3,1.4 MobyService.java,1.4,1.5 MobyDataType.java,1.5,1.6 MobyPrimaryDataSimple.java,1.3,1.4 MobyDataString.java,1.2,1.3 MobyNativeService.java,1.1,1.2 Central.java,1.8,1.9 MobyPrimaryDataSet.java,1.1,1.2 MobyDataInt.java,1.2,1.3 Utils.java,1.4,1.5
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataSimpleInstance.java,v
retrieving revision 1.6
retrieving revision 1.7
diff -u -r1.6 -r1.7
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataSimpleInstance.java 2005/04/05 15:14:53 1.6
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataSimpleInstance.java 2005/04/07 16:37:02 1.7
@@ -1,17 +1,18 @@
package org.biomoby.shared;
-import org.w3c.dom.Element;
-import org.w3c.dom.NodeList;
-import org.w3c.dom.Node;
-
import java.io.StringWriter;
-//JAXP 1.1
-import javax.xml.parsers.*;
-import javax.xml.transform.*;
-import javax.xml.transform.stream.*;
-import javax.xml.transform.dom.*;
+import javax.xml.transform.OutputKeys;
+import javax.xml.transform.Transformer;
+import javax.xml.transform.TransformerException;
+import javax.xml.transform.TransformerFactory;
+import javax.xml.transform.dom.DOMSource;
+import javax.xml.transform.stream.StreamResult;
+
+import org.w3c.dom.Element;
+import org.w3c.dom.Node;
+import org.w3c.dom.NodeList;
/**
* A class representing a MOBY object that has been instantiated.
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyData.java,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyData.java 2004/10/18 14:35:06 1.2
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyData.java 2005/04/07 16:37:02 1.3
@@ -6,7 +6,6 @@
package org.biomoby.shared;
-import java.util.*;
/**
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataDateTime.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataDateTime.java 2005/02/09 17:17:25 1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataDateTime.java 2005/04/07 16:37:02 1.2
@@ -4,6 +4,7 @@
import java.text.SimpleDateFormat;
import java.util.Calendar;
import java.util.GregorianCalendar;
+import java.util.IllegalFormatException;
import java.util.NoSuchElementException;
import java.util.StringTokenizer;
import java.util.TimeZone;
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobySecondaryData.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobySecondaryData.java 2003/09/24 14:33:37 1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobySecondaryData.java 2005/04/07 16:37:02 1.2
@@ -6,8 +6,11 @@
package org.biomoby.shared;
-import org.w3c.dom.*;
-import java.util.*;
+import java.util.Enumeration;
+import java.util.Vector;
+
+import org.w3c.dom.Element;
+import org.w3c.dom.NodeList;
/**
* A container representing a way how various secondary data types
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataFloat.java,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataFloat.java 2005/04/05 15:13:27 1.3
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataFloat.java 2005/04/07 16:37:02 1.4
@@ -1,6 +1,7 @@
package org.biomoby.shared;
-import java.math.*;
+import java.math.BigDecimal;
+import java.math.BigInteger;
/**
* A class representing a MOBY Float primitive. Note that the
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyRelationship.java,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyRelationship.java 2004/10/18 14:35:06 1.3
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyRelationship.java 2005/04/07 16:37:02 1.4
@@ -7,7 +7,6 @@
package org.biomoby.shared;
-import java.util.*;
/**
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyService.java,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -r1.4 -r1.5
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyService.java 2004/10/18 14:35:06 1.4
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyService.java 2005/04/07 16:37:02 1.5
@@ -7,7 +7,8 @@
package org.biomoby.shared;
-import java.util.*;
+import java.util.Enumeration;
+import java.util.Vector;
/**
* A container representing a service. But do not be too excited -
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataType.java,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -r1.5 -r1.6
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataType.java 2004/10/18 14:35:06 1.5
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataType.java 2005/04/07 16:37:02 1.6
@@ -7,7 +7,6 @@
package org.biomoby.shared;
-import java.util.*;
/**
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyPrimaryDataSimple.java,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyPrimaryDataSimple.java 2004/10/18 14:35:06 1.3
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyPrimaryDataSimple.java 2005/04/07 16:37:02 1.4
@@ -6,8 +6,11 @@
package org.biomoby.shared;
-import org.w3c.dom.*;
-import java.util.*;
+import java.util.Enumeration;
+import java.util.Vector;
+
+import org.w3c.dom.Element;
+import org.w3c.dom.NodeList;
/**
* A container representing a way how various primary data types
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataString.java,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataString.java 2005/02/09 17:20:38 1.2
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataString.java 2005/04/07 16:37:02 1.3
@@ -1,6 +1,5 @@
package org.biomoby.shared;
-import java.math.*;
/**
* A class representing a MOBY String primitive.
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyNativeService.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyNativeService.java 2004/03/09 00:20:13 1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyNativeService.java 2005/04/07 16:37:02 1.2
@@ -7,9 +7,6 @@
package org.biomoby.shared;
-import java.util.*;
-import java.io.*;
-import java.net.*;
/**
* A client-side interface to a Moby-compliant service.
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/Central.java,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -r1.8 -r1.9
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/Central.java 2004/10/18 14:35:06 1.8
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/Central.java 2005/04/07 16:37:02 1.9
@@ -7,9 +7,7 @@
package org.biomoby.shared;
-import java.util.*;
-import java.io.*;
-import java.net.*;
+import java.util.Map;
/**
* An interface to the Moby Registry. <p>
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyPrimaryDataSet.java,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyPrimaryDataSet.java 2003/09/24 14:33:37 1.1
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyPrimaryDataSet.java 2005/04/07 16:37:02 1.2
@@ -6,8 +6,11 @@
package org.biomoby.shared;
-import org.w3c.dom.*;
-import java.util.*;
+import java.util.Enumeration;
+import java.util.Vector;
+
+import org.w3c.dom.Element;
+import org.w3c.dom.NodeList;
/**
* A container representing a way how a named collection of various
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataInt.java,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataInt.java 2005/02/09 17:20:38 1.2
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/MobyDataInt.java 2005/04/07 16:37:02 1.3
@@ -1,6 +1,7 @@
package org.biomoby.shared;
-import java.math.*;
+import java.math.BigDecimal;
+import java.math.BigInteger;
/**
* A class representing a MOBY Integer primitive. Note that the
===================================================================
RCS file: /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/Utils.java,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -r1.4 -r1.5
--- /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/Utils.java 2004/04/02 16:40:23 1.4
+++ /home/repository/moby/moby-live/Java/src/main/org/biomoby/shared/Utils.java 2005/04/07 16:37:02 1.5
@@ -7,9 +7,9 @@
package org.biomoby.shared;
-import org.apache.axis.AxisFault;
import javax.xml.namespace.QName;
-import java.io.*;
+
+import org.apache.axis.AxisFault;
/**
* This is a set of several utility methods which may be useful for
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