[MOBY-guts] biomoby commit

[Nina Opushneva]

nopushneva
Mon Nov  1 14:21:42 EST 2004
Update of /home/repository/moby/moby-live/Java
In directory pub.open-bio.org:/tmp/cvs-serv17614

Modified Files:
	build.xml 
Log Message:
add target for building RDFagent files

moby-live/Java build.xml,1.8,1.9
===================================================================
RCS file: /home/repository/moby/moby-live/Java/build.xml,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -r1.8 -r1.9
--- /home/repository/moby/moby-live/Java/build.xml	2004/10/18 14:35:05	1.8
+++ /home/repository/moby/moby-live/Java/build.xml	2004/11/01 19:21:42	1.9
@@ -31,7 +31,7 @@
    <property name="documented.files"    value="${src.clients}/MobyCmdLineClient.java"/>
    <property name="dist.dir"            value="${docs.dir}/dist"/>
 
-   <!-- The directory containing third-party libraries          -->
+       <!-- The directory containing third-party libraries          -->
    <!-- Note: this directory can be populated from remote sites -->
    <!--       using target 'gather', e.g. ./build.sh gather     -->
    <property name="lib.dir" value="lib"/>
@@ -42,6 +42,7 @@
    <property name="build.lib"      value="${build.dir}/lib"/>
    <property name="build.clients"  value="${build.dir}/Clients"/>
    <property name="build.services" value="${build.dir}/Services"/>
+   <property name="build.rdfagent" value="${build.dir}/rdfagent"/>
    <property name="build.dist"     value="${build.dir}/dist"/>
    <property name="build.webapps"  value="${build.dir}/webapps/jmoby"/>
    <property name="build.run"      value="${build.dir}/run"/>
@@ -65,7 +66,8 @@
          <include name="*.jar"/>
       </fileset>
    </path>
-
+   
+   
    <!-- A remote URL containing third-party libraries -->
    <!-- Note: this is used by the 'gather' task       -->
    <property name="remote.dir" value="http://industry.ebi.ac.uk/~senger/storage/shared"/>
@@ -104,6 +106,8 @@
    <property name="junit"             value="junit.jar"/>
    <property name="mail"              value="mail.jar"/>
    <property name="rdf-api"           value="rdf-api-2001-01-19.jar"/>
+   
+   
     
    <!-- ================================================================== -->
    <!--                            Targets/Tasks                           -->
@@ -176,6 +180,7 @@
       <mkdir dir="${build.clients}"/>
       <mkdir dir="${build.clients}/help"/>
       <mkdir dir="${build.services}"/>
+      <mkdir dir="${build.rdfagent}"/>
       <mkdir dir="${build.run}"/>
 
       <!-- Conditions -->
@@ -193,7 +198,7 @@
             <available file="${lib.dir}/${wsdl4j}"/>
             <available file="${lib.dir}/${axis}"/>
             <available file="${lib.dir}/${log4j}"/>
-            <available file="${lib.dir}/${saaj}"/>
+	    <available file="${lib.dir}/${saaj}"/>
             <available file="${lib.dir}/${servlet}"/>
             <available file="${lib.dir}/${activation}"/>
             <available file="${lib.dir}/${adenine}"/>
@@ -212,6 +217,7 @@
             <available file="${lib.dir}/${mail}"/>
             <available file="${lib.dir}/${rdf-api}"/>
 
+
          </and>
       </condition>
 
@@ -388,6 +394,28 @@
          </manifest>
       </jar>
    </target>
+  
+   
+   <!-- ================================================================== -->
+   <!-- Builds a jar file with RDFagent classes                            -->
+   <!-- ================================================================== -->
+   <target name="jar_rdfagent" depends="compile"
+      description="Create a jar file with RDF Agent classes.">
+      <jar destfile="${build.lib}/RDFagent.jar"> 
+         <fileset dir="${build.classes}" includes="org/biomoby/registry/rdfagent/**"/>
+        <manifest>
+            <attribute name="Built-By" value="${user.name}"/>
+	   <!--section name="classpath"-->
+	         <attribute name="Class-Path" value="lib/commons-logging.jar lib/concurrent.jar lib/icu4j.jar lib/jakarta-oro-2.0.5.jar lib/jena.jar lib/junit.jar lib/log4j-1.2.4.jar lib/rdf-api-2001-01-19.jar lib/xercesImpl.jar lib/xml-apis.jar lib/jdom.jar lib/mail.jar lib/activation.jar"/>
+                 <attribute name="Main-Class" value="org.biomoby.registry.rdfagent.verifier.Main"/>
+           <!--/section-->
+         </manifest> 	 
+      </jar>
+        
+						  
+   </target>
+   
+   
 
    <!-- ================================================================== -->
    <!-- Builds files for binary distribution                               -->
@@ -431,8 +459,53 @@
 
    </target>
 
-   <property name="deploy.war.file" value="${build.webapps}/jmoby.war"/>
+   
+   
+   <!-- ================================================================== -->
+   <!-- Builds RDF Agent files for binary distribution                     -->
+   <!-- ================================================================== -->
+   <target name="bindist_rdfagent" depends="compile,jar_rdfagent"
+      description="Create RDF Agent binary distribution.">
 
+      <!-- Name of the final binary distribution (without extension) -->
+      <property name="destfile" value="${dist.dir}/rdfagent-${TODAY_SHORT}"/>
+
+      <!-- Create a binary distribution by copying all wanted files to one place -->
+    
+      <delete dir="${build.rdfagent}"/>
+      <mkdir dir="${build.rdfagent}"/>
+      <copy todir="${build.rdfagent}/lib">
+         <fileset file="${lib.dir}/${activation}"/>
+	 <fileset file="${lib.dir}/${commons-logging}"/>
+         <fileset file="${lib.dir}/${concurrent}"/>
+         <fileset file="${lib.dir}/${icu4j}"/>
+         <fileset file="${lib.dir}/${jakarta-oro}"/>
+         <fileset file="${lib.dir}/${jena}"/>
+         <fileset file="${lib.dir}/${junit}"/>
+         <fileset file="${lib.dir}/${jdom}"/>
+         <fileset file="${lib.dir}/${log4j}"/>
+         <fileset file="${lib.dir}/${mail}"/>
+         <fileset file="${lib.dir}/${rdf-api}"/>
+         <fileset file="${lib.dir}/${xercesImpl}"/>
+         <fileset file="${lib.dir}/${xml-apis}"/>
+       </copy>	 
+       <copy todir="${build.rdfagent}">	 
+         <fileset dir="${build.lib}" includes="RDFagent.jar"/>
+      </copy>
+      <copy file="${src.config}/RDFagent_config.xml" todir="${build.rdfagent}">
+      </copy>       			
+      <copy todir="${build.rdfagent}">
+         <fileset dir="${src.support}/rdfagent" excludes="MANIFEST.MF"/>         
+      </copy>
+      <chmod dir="${build.rdfagent}" perm="ugo+rx" includes="run-RDFagent, reset" excludes="*.bat"/>
+
+      <tar destfile="${destfile}.tar.gz" basedir="${build.rdfagent}" compression="gzip"/>
+      <zip destfile="${destfile}.zip" basedir="${build.rdfagent}"/>
+
+   </target>
+
+   <property name="deploy.war.file" value="${build.webapps}/jmoby.war"/>
+  
    <!-- ================================================================== -->
    <!-- Move distribution of packed servlets (.war file)                   -->
    <!-- ================================================================== -->