[MOBY-guts] biomoby commit

Gary Schlitz gss at pub.open-bio.org
Thu Apr 1 00:33:35 UTC 2004 

gss
Wed Mar 31 19:33:35 EST 2004
Update of /home/repository/moby/moby-live/S-MOBY/ref-impl/example-providers/acmepubs.com/WebRoot
In directory pub.open-bio.org:/tmp/cvs-serv2062/WebRoot

Modified Files:
	citationSearch.rdf citationSearch.n3 
Log Message:
Changes to vocabulary, incomplete changes to servlet code to handle
new description graph.

moby-live/S-MOBY/ref-impl/example-providers/acmepubs.com/WebRoot citationSearch.rdf,1.3,1.4 citationSearch.n3,1.3,1.4
===================================================================
RCS file: /home/repository/moby/moby-live/S-MOBY/ref-impl/example-providers/acmepubs.com/WebRoot/citationSearch.rdf,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/S-MOBY/ref-impl/example-providers/acmepubs.com/WebRoot/citationSearch.rdf	2004/03/30 23:54:19	1.3
+++ /home/repository/moby/moby-live/S-MOBY/ref-impl/example-providers/acmepubs.com/WebRoot/citationSearch.rdf	2004/04/01 00:33:35	1.4
@@ -1,32 +1,28 @@
 <rdf:RDF
+    xmlns:go="http://www.go.org:8080/terms#"
     xmlns:acmepubs="http://www.acmepubs.com:8080/"
-    xmlns:mygrid="http://www.mygrid.org:8080/terms#"
     xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
     xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
     xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
     xmlns:owl="http://www.w3.org/2002/07/owl#"
     xmlns:pubs="http://www.pubs.org:8081/terms#"
-    xmlns:moby="http://www.s-moby.org:8080/terms#" >
+    xmlns:moby="http://www.s-moby.org:8080/terms#"
+    xmlns:sgd="http://www.sgd.org:8080/terms#" >
+  <rdf:Description rdf:about="http://www.acmepubs.com:8080/geneSymbol">
+    <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
+    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#DataTypeProperty"/>
+    <rdfs:domain rdf:resource="http://www.go.org:8080/terms#GeneSymbol"/>
+  </rdf:Description>
   <rdf:Description rdf:nodeID="A0">
-    <acmepubs:pubDate rdf:nodeID="A1"/>
-    <rdf:type rdf:resource="http://www.pubs.org:8081/terms#PubAbstract"/>
+    <acmepubs:literatureGuideURL rdf:nodeID="A1"/>
     <rdf:type rdf:resource="http://www.s-moby.org:8080/terms#Object"/>
-  </rdf:Description>
-  <rdf:Description rdf:about="http://www.acmepubs.com:8080/geneID">
-    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#DataTypeProperty"/>
-    <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#string"/>
-    <rdfs:domain rdf:resource="http://www.mygrid.org:8080/terms#gene_id"/>
+    <rdf:type rdf:resource="http://www.sgd.org:8080/terms#LiteratureGuide"/>
   </rdf:Description>
   <rdf:Description rdf:nodeID="A2">
-    <rdf:type rdf:resource="http://www.s-moby.org:8080/terms#Subject"/>
+    <acmepubs:geneSymbol rdf:nodeID="A3"/>
+    <rdf:type rdf:resource="http://www.go.org:8080/terms#GeneSymbol"/>
     <moby:mapsTo rdf:nodeID="A0"/>
-    <rdf:type rdf:resource="http://www.mygrid.org:8080/terms#gene_id"/>
-    <acmepubs:geneID rdf:nodeID="A3"/>
-  </rdf:Description>
-  <rdf:Description rdf:nodeID="A4">
-    <rdf:type rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Bag"/>
-    <moby:hasMapping rdf:nodeID="A2"/>
-    <rdf:type rdf:resource="http://www.s-moby.org:8080/terms#Graph"/>
+    <rdf:type rdf:resource="http://www.s-moby.org:8080/terms#Subject"/>
   </rdf:Description>
   <rdf:Description rdf:about="http://www.acmepubs.com:8080/citationSearch">
     <rdf:type rdf:resource="http://www.pubs.org:8081/terms#citationSearch"/>
@@ -34,9 +30,14 @@
     <rdfs:comment>Industry standard search</rdfs:comment>
     <moby:operatesOn rdf:nodeID="A4"/>
   </rdf:Description>
-  <rdf:Description rdf:about="http://www.acmepubs.com:8080/pubDate">
-    <rdfs:domain rdf:resource="http://www.pubs.org:8081/terms#PubAbstract"/>
+  <rdf:Description rdf:about="http://www.acmepubs.com:8080/literatureGuideURL">
+    <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#anyURI"/>
     <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#DataTypeProperty"/>
-    <rdfs:range rdf:resource="http://www.w3.org/2001/XMLSchema#date"/>
+    <rdfs:domain rdf:resource="http://www.sgd.org:8080/terms#LiteratureGuide"/>
+  </rdf:Description>
+  <rdf:Description rdf:nodeID="A4">
+    <rdf:type rdf:resource="http://www.s-moby.org:8080/terms#Graph"/>
+    <moby:hasMapping rdf:nodeID="A2"/>
+    <rdf:type rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Bag"/>
   </rdf:Description>
 </rdf:RDF>
\ No newline at end of file

===================================================================
RCS file: /home/repository/moby/moby-live/S-MOBY/ref-impl/example-providers/acmepubs.com/WebRoot/citationSearch.n3,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/S-MOBY/ref-impl/example-providers/acmepubs.com/WebRoot/citationSearch.n3	2004/03/30 23:54:19	1.3
+++ /home/repository/moby/moby-live/S-MOBY/ref-impl/example-providers/acmepubs.com/WebRoot/citationSearch.n3	2004/04/01 00:33:35	1.4
@@ -1,7 +1,8 @@
 @prefix pubs:     <http://www.pubs.org:8081/terms#> .
 @prefix xsd:      <http://www.w3.org/2001/XMLSchema#> .
 @prefix acmepubs: <http://www.acmepubs.com:8080/> .
- at prefix mygrid:   <http://www.mygrid.org:8080/terms#> .
+ at prefix go:       <http://www.go.org:8080/terms#> .
+ at prefix sgd:      <http://www.sgd.org:8080/terms#> .
 @prefix moby:     <http://www.s-moby.org:8080/terms#> .
 @prefix rdfs:     <http://www.w3.org/2000/01/rdf-schema#> .
 @prefix rdf:      <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@@ -17,20 +18,20 @@
     moby:hasMapping _:bnode2 .
 
 _:bnode2
-    a moby:Subject, mygrid:gene_id ;
+    a moby:Subject, go:GeneSymbol ;
     moby:mapsTo _:bnode3 ;
-    acmepubs:geneID _:bnode4 .
+    acmepubs:geneSymbol _:bnode4 .
 
 _:bnode3
-    a moby:Object, pubs:PubAbstract ;
-    acmepubs:pubDate _:bnode6 .
+    a moby:Object, sgd:LiteratureGuide ;
+    acmepubs:literatureGuideURL _:bnode6 .
 
-acmepubs:geneID
+acmepubs:geneSymbol
     a owl:DataTypeProperty ;
-    rdfs:domain mygrid:gene_id ;
+    rdfs:domain go:GeneSymbol ;
     rdfs:range xsd:string .
 
-acmepubs:pubDate
+acmepubs:literatureGuideURL
     a owl:DataTypeProperty ;
-    rdfs:domain pubs:PubAbstract ;
-    rdfs:range xsd:date .
\ No newline at end of file
+    rdfs:domain sgd:LiteratureGuide ;
+    rdfs:range xsd:anyURI .
\ No newline at end of file

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