[MOBY-guts] biomoby commit

Gary Schlitz gss at pub.open-bio.org
Thu Jun 17 17:35:52 UTC 2004


gss
Thu Jun 17 13:35:52 EDT 2004
Update of /home/repository/moby/moby-live/S-MOBY/ref-impl/server/WebRoot
In directory pub.open-bio.org:/tmp/cvs-serv25420/S-MOBY/ref-impl/server/WebRoot

Modified Files:
	domains.html 
Log Message:
Minor fixes

moby-live/S-MOBY/ref-impl/server/WebRoot domains.html,1.3,1.4
===================================================================
RCS file: /home/repository/moby/moby-live/S-MOBY/ref-impl/server/WebRoot/domains.html,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- /home/repository/moby/moby-live/S-MOBY/ref-impl/server/WebRoot/domains.html	2004/04/01 00:34:23	1.3
+++ /home/repository/moby/moby-live/S-MOBY/ref-impl/server/WebRoot/domains.html	2004/06/17 17:35:52	1.4
@@ -1,178 +1,176 @@
 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
+
 <html>
-<head>
-  <title>Semantic MOBY Server - Hosted Pages</title>
-</head>
-<body>
-<table style="text-align: center; width: 100%;" border="1"
- cellpadding="0" cellspacing="0">
-  <tbody>
-    <tr>
-      <td
- style="vertical-align: top; background-color: rgb(204, 204, 204);"> <b>Semantic
-MOBY Server - Hosted Pages</b> </td>
-    </tr>
-  </tbody>
-</table>
-<p>
-The Semantic MOBY reference implementation server hosts the following
-pages:<br>
-<br>
-<table style="text-align: left; width: 100%;" border="1" cellpadding="2"
- cellspacing="0">
-  <tbody>
-    <tr>
-      <td style="vertical-align: top;"><span style="font-weight: bold;">Page</span><br>
-      </td>
-      <td style="vertical-align: top;"><span style="font-weight: bold;">Description</span><br>
-      </td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.acmepubs.com:8080">www.acmepubs.com</a></td>
-      <td style="vertical-align: top;">Home page of an
-acmepubs.com, a hypothetical citation search provider.<br>
-      </td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.acmepubs.com:8080/citationSearch">www.acmepubs.com/citationSearch</a></td>
-      <td style="vertical-align: top;">Provider description
-graph for acmepubs.com. Note that doing an HTTP GET on this URI (e.g.
-by clicking on the link at the left), by definition returns an RDF
-graph that describes the provider. Also note that in this reference
-implementation, the URI is implemented as a Java Servlet.<br>
-      </td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.megapubs.com:8080">www.megapubs.com</a></td>
-      <td style="vertical-align: top;">Home page of an
-megapubs.com, another example citation search provider.</td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.megapubs.com:8080/citationSearch">www.megapubs.com/citationSearch</a></td>
-      <td style="vertical-align: top;">Provider description
-graph for megapubs.com. The notes regarding the
-www.acmepubs.com/citationSearch also apply to this URI.<br>
-      </td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.pubs.org:8080">www.pubs.org</a></td>
-      <td style="vertical-align: top;">Home page of a
-hypothetical vocabulary provider, pubs.org.<br>
-      </td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.pubs.org:8080/terms">www.pubs.org/terms</a></td>
-      <td style="vertical-align: top;">The vocabulary of terms
-defined by pubs.org. Note that in this reference implementation, unlike
-the two citation search providers, this vocabulary is provided in a
-resource file (terms) delivered as is by the web server - no servlets
-are involved.<br>
-      </td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a href="http://www.go.org:8080">www.go.org</a></td>
-      <td style="vertical-align: top;">Home page of a
-hypothetical vocabulary provider, go.org. This provider is meant to be
-representative of the type of vocabulary information that the real Gene
-Ontology (GO) Consortium would need to provide in order to be a
-Semantic MOBY vocabulary provider.<br>
-      </td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.go.org:8080/terms">www.go.org/terms</a></td>
-      <td style="vertical-align: top;">The vocabulary of terms
-defined by go.org. The notes regarding www.pubs.org/terms apply
-here as well.<br>
-      </td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.sgd.org:8080/">www.sgd.org</a></td>
-      <td style="vertical-align: top;">Home page of a
-hypothetical vocabulary provider, sgd.org. This provider is meant to be
-representative of the type of vocabulary
-information that the real <i>Saccharomyces Gene Database </i>would
-need to
-provide in order to be a Semantic MOBY vocabulary provider.</td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.sgd.org:8080/terms">www.sgd.org/terms</a></td>
-      <td style="vertical-align: top;">The vocabulary of terms
-defined by go.org. The notes regarding www.pubs.org/terms apply
-here as well.</td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;">www.s-moby.org</td>
-      <td style="vertical-align: top;">This page you're
-currently viewing.</td>
-    </tr>
-    <tr>
-      <td style="vertical-align: top;"><a
- href="http://www.s-moby.org:8080/terms">www.s-moby.org/terms</a></td>
-      <td style="vertical-align: top;">The Semantic MOBY
-vocabulary terms. The notes regarding www.pubs.org/terms
-apply here as well.</td>
-    </tr>
-  </tbody>
-</table>
-<span style="font-weight: bold;"></span><br>
-</p>
-<div style="margin-left: 40px;">
-<div style="margin-left: 40px;"></div>
-</div>
-Since these hosts are virtual, in order to access their pages by name,
-you will need to modify how hosts are looked up. This can most easily
-be
-done by adding
-entries to the <code>hosts</code> file, making the host names refer to
-the
-local host (<code>127.0.0.1</code>). The Tomcat web server / servlet
-container then resolves to a virtual host by name. The following
-entries
-should be added
-to the <code>hosts</code> file of the given operating system on which
-the
-test server is running:
-<p><u>Under Linux/Unix, add to <code>/etc/hosts</code></u>
-</p>
-<ul>
-  <code>
-127.0.0.1 www.acmepubs.com acmepubs.com<br>
-127.0.0.1 www.megapubs.com megapubs.com<br>
-127.0.0.1 www.pubs.org pubs.org<br>
-127.0.0.1 www.go.org go.org<br>
-127.0.0.1 www.sgd.org sgd.org<br>
-127.0.0.1 www.s-moby.org s-moby.org<br>
-127.0.0.1 www.smobydev.org smobydev.org<br>
-  </code>
-</ul>
-<p>
-<u>Under Windows NT/2000/XP, add to
-<code>&lt;WIN_DIR&gt;/system32/drivers/etc/hosts</code></u>
-</p>
-<ul>
-  <code>
-127.0.0.1 acmepubs.com<br>
-127.0.0.1 www.acmepubs.com<br>
-127.0.0.1 megapubs.com<br>
-127.0.0.1 www.megapubs.com<br>
-127.0.0.1 go.org<br>
-127.0.0.1 www.go.org<br>
-127.0.0.1 sgd.org<br>
-127.0.0.1 www.sgd.org<br>
-127.0.0.1 pubs.org<br>
-127.0.0.1 www.pubs.org<br>
-127.0.0.1 s-moby.org<br>
-127.0.0.1 www.s-moby.org<br>
-  </code>
-</ul>
-</body>
+  <head>
+    <meta name="generator" content="HTML Tidy, see www.w3.org">
+
+    <title>Semantic MOBY Server - Hosted Pages</title>
+  </head>
+
+  <body>
+    <table style="WIDTH: 100%; TEXT-ALIGN: center" border="1"
+    cellpadding="0" cellspacing="0">
+      <tbody>
+        <tr>
+          <td style=
+          "VERTICAL-ALIGN: top; BACKGROUND-COLOR: rgb(204,204,204)">
+          <b>Semantic MOBY Server - Hosted Pages</b></td>
+        </tr>
+      </tbody>
+    </table>
+
+    <p>The Semantic MOBY reference implementation server hosts the
+    following pages:<br>
+    <br>
+    </p>
+
+    <table style="WIDTH: 100%; TEXT-ALIGN: left" border="1"
+    cellpadding="2" cellspacing="0">
+      <tbody>
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><span style=
+          "FONT-WEIGHT: bold">Page</span><br>
+          </td>
+
+          <td style="VERTICAL-ALIGN: top"><span style=
+          "FONT-WEIGHT: bold">Description</span><br>
+          </td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.acmepubs.com:8080">www.acmepubs.com</a></td>
+
+          <td style="VERTICAL-ALIGN: top">Home page of an acmepubs.com,
+          a hypothetical citation search provider.<br>
+          </td>
+        </tr>
+
+        <tr>
+          <td><a href=
+          "http://www.acmepubs.com:8080/terms">http://www.acmepubs.com/terms</a></td>
+
+          <td>The vocabulary of terms defined by acmepubs.com.</td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.acmepubs.com:8080/citationSearch">www.acmepubs.com/citationSearch</a></td>
+
+          <td style="VERTICAL-ALIGN: top">Provider description graph
+          for acmepubs.com. Note that doing an HTTP GET on this URI
+          (e.g. by clicking on the link at the left), by definition
+          returns an RDF graph that describes the provider. Also note
+          that in this reference implementation, the URI is implemented
+          as a Java Servlet.<br>
+          </td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.megapubs.com:8080">www.megapubs.com</a></td>
+
+          <td style="VERTICAL-ALIGN: top">Home page of an megapubs.com,
+          another example citation search provider.</td>
+        </tr>
+
+        <tr>
+          <td><a href=
+          "http://www.megapubs.com:8080/terms">www.megapubs.com/terms</a></td>
+
+          <td>The vocabulary of terms defined by megapubs.com.</td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.megapubs.com:8080/citationSearch">www.megapubs.com/citationSearch</a></td>
+
+          <td style="VERTICAL-ALIGN: top">Provider description graph
+          for megapubs.com. The notes regarding the
+          www.acmepubs.com/citationSearch also apply to this URI.<br>
+          </td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.pubs.org:8080">www.pubs.org</a></td>
+
+          <td style="VERTICAL-ALIGN: top">Home page of a hypothetical
+          vocabulary provider, pubs.org.<br>
+          </td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.pubs.org:8080/terms">www.pubs.org/terms</a></td>
+
+          <td style="VERTICAL-ALIGN: top">The vocabulary of terms
+          defined by pubs.org. Note that in this reference
+          implementation, unlike the two citation search providers,
+          this vocabulary is provided in a resource file (terms)
+          delivered as is by the web server - no servlets are
+          involved.<br>
+          </td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.go.org:8080">www.go.org</a></td>
+
+          <td style="VERTICAL-ALIGN: top">Home page of a hypothetical
+          vocabulary provider, go.org. This provider is meant to be
+          representative of the type of vocabulary information that the
+          real Gene Ontology (GO) Consortium would need to provide in
+          order to be a Semantic MOBY vocabulary provider.<br>
+          </td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.go.org:8080/terms">www.go.org/terms</a></td>
+
+          <td style="VERTICAL-ALIGN: top">The vocabulary of terms
+          defined by go.org. The notes regarding www.pubs.org/terms
+          apply here as well.<br>
+          </td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.sgd.org:8080/">www.sgd.org</a></td>
+
+          <td style="VERTICAL-ALIGN: top">Home page of a hypothetical
+          vocabulary provider, sgd.org. This provider is meant to be
+          representative of the type of vocabulary information that the
+          real <i>Saccharomyces Gene Database</i> would need to provide
+          in order to be a Semantic MOBY vocabulary provider.</td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.sgd.org:8080/terms">www.sgd.org/terms</a></td>
+
+          <td style="VERTICAL-ALIGN: top">The vocabulary of terms
+          defined by go.org. The notes regarding www.pubs.org/terms
+          apply here as well.</td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top">www.s-moby.org</td>
+
+          <td style="VERTICAL-ALIGN: top">This page you're currently
+          viewing.</td>
+        </tr>
+
+        <tr>
+          <td style="VERTICAL-ALIGN: top"><a href=
+          "http://www.s-moby.org:8080/terms">www.s-moby.org/terms</a></td>
+
+          <td style="VERTICAL-ALIGN: top">The Semantic MOBY vocabulary
+          terms. The notes regarding www.pubs.org/terms apply here as
+          well.</td>
+        </tr>
+      </tbody>
+    </table>
+  </body>
 </html>




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