[MOBY-guts] biomoby commit
Gary Schlitz
gss at pub.open-bio.org
Wed Jul 21 22:01:20 UTC 2004
gss
Wed Jul 21 18:01:20 EDT 2004
Update of /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot
In directory pub.open-bio.org:/tmp/cvs-serv12905/S-MOBY/ref-impl/semanticmoby.org/WebRoot
Modified Files:
help.html index.html
Added Files:
.cvsignore
Log Message:
Many changes prior to BOSC
moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot .cvsignore,NONE,1.1 help.html,1.1,1.2 index.html,1.1,1.2
===================================================================
RCS file: /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/help.html,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/help.html 2004/07/15 20:27:14 1.1
+++ /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/help.html 2004/07/21 22:01:20 1.2
@@ -1,26 +1,56 @@
<html>
<head>
-<title>Semantic MOBY Help</title>
+<title>Semantic MOBY Search Help</title>
</head>
<center>
<h1>
<span style="color: rgb(51, 204, 0);"><i>Semantic</i>
<span style="color: blue">M<span style="color: red">O<span style="color: blue">B<span style="color: red">Y
-<span style="color: gray">Help
+<span style="color: gray">Search Help
</h1>
-<hr>
</center>
-<p style="color: black">
+<font color="black" face="sans-serif">
Semantic MOBY maintains a searchable repository of descriptions of
-providers of services that are available on the web. At the heart
-of these descriptions is the notion of <i>mapping</i>, that a provider
-"accepts" one type of thing, maps it to another thing that it returns
-as a result. For example, entering
-the following terms is asking Semantic MOBY to search its repository
-for providers that accept terms described as "gene symbols" and return
-things whose descriptions match the wildcard pattern "publication*".
+<i>providers</i> of services that are available on the web. At the heart
+of these descriptions is the notion that providers map one type
+of thing (what the provider <i>accepts</i>) to another type of thing (what
+the provider <i>returns</i>).
+<br><br>
+Providers, as well as things accepted and returned by providers, are
+classified using web-accessible descriptions, and these descriptions
+have keywords associated with them. For example, the following shows
+a query for providers whose descriptions include the keyword "hello":
<br><br>
<center>
-<img src="help1.jpg"/>.
+<img src="images/help1.png"/>.
</center>
+<br>
+<u>Search hints</u>
+<ul>
+<li>Keywords are not case sensitive, so <code>HELLO</code> means the
+same thing as <code>hello</code> as does <code>HeLloW</code>.
+<br><br>
+<li>The wildcard character (<code>*</code>) can be used at the end of a keyword
+to match keywords that start with the characters before the wildcard.
+For example, <code>he*</code> will match <code>hello</code> as well
+as <code>help</code>.
+<br><br>
+<li>Multiple words enclosed in double quotes are considered to be a
+single keyword. For example, the quoted string <code>"gene symbol"</code>
+is considered to be a single keyword composed of 11 characters, including a space.
+The wildcard character is interpreted literally (i.e. as the '<code>*</code>'
+character) if it appears within a quoted string.
+<br><br>
+<li>Multiple keywords may be typed in one of the fields; this means to
+search for <i>any</i> of the keywords in that field. For example,
+typing <code>fat sugar</code> in the accepts field will search for
+providers that map either fat or sugar to something else.
+<br><br>
+<li>If keywords are typed in multiple fields, then only providers that
+match keywords for <i>all</i> the fields will match. For example,
+typing <code>fat sugar</code> into the accepts field, and
+<code>"weight gain"</code> into the returns field will search for
+providers that map either fat or sugar to weight gain.
+<br><br>
+</ul>
</html>
===================================================================
RCS file: /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/index.html,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/index.html 2004/07/15 20:27:14 1.1
+++ /home/repository/moby/moby-live/S-MOBY/ref-impl/semanticmoby.org/WebRoot/index.html 2004/07/21 22:01:20 1.2
@@ -16,21 +16,45 @@
<td align="center">Accepts</td>
<td align="center">Returns</td></tr>
<tr>
- <td><input size="30" name="provider"></td>
- <td><input size="30" name="accepts"></td>
- <td><input size="30" name="returns"></td></tr>
+ <td><input size="35" name="provider"></td>
+ <td><input size="35" name="accepts"></td>
+ <td><input size="35" name="returns"></td></tr>
</table>
<br>
<center>
Type any terms into the boxes above and press Search
<br>
-(for example type Hello into the Provider box)
+(for example type 'hello' (without quotes) into the Provider box)
<br><br>
-</center>
<input value="Search" type="submit">
</form>
<br>
<a href="about.html">About Semantic MOBY</a>
<a href="help.html" target="_blank">Help on Searching</a>
+<br><br><br>
+<table border="0" cellpadding="2" width="65%">
+<tr>
+<td align="center" valign="bottom" width="33%">
+ <a href="http://www.cshl.edu" target="_blank">
+ <img border="0" src="images/cshl-logo.jpg" alt="CSHL"/></a></td>
+<td align="center" valign="bottom" width="33%">
+ <a href="http://www.ncgr.org" target="_blank">
+ <img border="0" src="images/ncgr-logo.jpg" alt="NCGR"/></a></td>
+<td align="center" valign="bottom" width="33%">
+ <a href="http://www.nsf.gov" target="_blank">
+ <img border="0" src="images/nsf-logo.jpg" alt="NSF"/></a></td>
+</tr>
+<td align="center" valign="top" width="33%">
+ <a href="http://www.cshl.edu" target="_blank">
+ Cold Spring Harbor Laboratory</a></td>
+<td align="center" valign="top" width="33%">
+ <a href="http://www.ncgr.org" target="_blank">
+ National Center for Genome Resources</a></td>
+<td align="center" valign="top" width="33%">
+ <a href="http://www.nsf.gov" target="_blank">
+ National Science Foundation</a></td>
+<tr>
+</tr>
+</table>
</center>
</html>
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