[MOBY-guts] biomoby commit

[Yan Wong]

yanwong
Wed Dec  8 09:47:49 EST 2004
Update of /home/repository/moby/moby-live/Python/bioMoby/ontology
In directory pub.open-bio.org:/tmp/cvs-serv29613

Added Files:
	AlleleAssociation.py Allele_freq.py AminoAcidSequence.py 
	B64_Encoded_PNG.py B64_Encoded_Postscript.py 
	B64_encoded_PDB.py B64_encoded_gif.py B64_encoded_jpeg.py 
	BLASTText.py BasicGFFSequenceFeature.py 
	ClustalAlnFormattedText.py ClustalMsfFormattedText.py 
	CommentedAASequence.py CommentedDNASequence.py 
	CommentedRNASequence.py DNASequence.py 
	DNASequenceWithGFFFeatures.py DateTime.py Decypher_Text.py 
	Edge.py EmblFlatfile.py FASTA.py FASTA_AA.py FASTA_NA.py 
	FASTA_Text.py GFF.py GFF1.py GFF2.py GFF2_5.py GFF3.py 
	GO_Term.py GenbankFlatfile.py GenericSequence.py 
	GeneticElement.py Genotype.py Germplasm_Details.py 
	Germplasm_List.py Global_Keyword.py HBond_Pair.py 
	HFormatText.py Haplotyping_Study_obj.py ICIS_Query.py 
	ICIS_Query2.py ICIS_Query3.py IntAct_XML.py Interaction.py 
	InteractionMethod.py Interaction_partner.py Interactor.py 
	MEME_Text.py MGIS_ACCESSION.py MMP_Locus.py MO_Term_Test.py 
	MmCIFText.py Multi_key_value_pair.py 
	MyTestingDataType_11024145298313.py MyTree.py 
	NCBI_BLAST_Text.py NCBI_Blast_XML.py NCBI_Blast_XML_Gif.py 
	NCBI_Blast_XML_Gif_Map.py NCBI_MEME_Text.py 
	NucleotideSequence.py PDBFormattedText.py PDBText.py PDGJOB.py 
	PHDText.py PMUTText.py PSeaTextFormatted.py 
	PhenotypeDescription.py PubMedMEDLINE.py RNASequence.py 
	SINGER_ACCESSION.py Sample.py SchematikonMotifID.py 
	SchematikonMotifSupport.py SchematikonSegmentAttributes.py 
	SchematikonSegmentID.py SchematikonStructureAnnotation.py 
	SchematikonVorocodeName.py Scored_acronym_string.py 
	SimpleAnnotatedGIFImage.py SimpleAnnotatedJPEGImage.py 
	Simple_key_value_pair.py Snp_allele.py Snp_genotype.py 
	Study.py TEST.py TargetP_result.py Testout.py TextBase64.py 
	TextFormatted.py TextHtml.py TextPlain.py TextUuencoded.py 
	TextXml.py Text_plain.py Trait_Details.py Tree.py 
	TropGENE_ACCESSION.py TropGENE_Diversity_Matrix.py 
	TropGENE_LOCUS.py VirtualSequence.py WU_BLAST_Text.py 
	Wildcard_Query.py __init__.py 
Log Message:


moby-live/Python/bioMoby/ontology AlleleAssociation.py,NONE,1.1 Allele_freq.py,NONE,1.1 AminoAcidSequence.py,NONE,1.1 B64_Encoded_PNG.py,NONE,1.1 B64_Encoded_Postscript.py,NONE,1.1 B64_encoded_PDB.py,NONE,1.1 B64_encoded_gif.py,NONE,1.1 B64_encoded_jpeg.py,NONE,1.1 BLASTText.py,NONE,1.1 BasicGFFSequenceFeature.py,NONE,1.1 ClustalAlnFormattedText.py,NONE,1.1 ClustalMsfFormattedText.py,NONE,1.1 CommentedAASequence.py,NONE,1.1 CommentedDNASequence.py,NONE,1.1 CommentedRNASequence.py,NONE,1.1 DNASequence.py,NONE,1.1 DNASequenceWithGFFFeatures.py,NONE,1.1 DateTime.py,NONE,1.1 Decypher_Text.py,NONE,1.1 Edge.py,NONE,1.1 EmblFlatfile.py,NONE,1.1 FASTA.py,NONE,1.1 FASTA_AA.py,NONE,1.1 FASTA_NA.py,NONE,1.1 FASTA_Text.py,NONE,1.1 GFF.py,NONE,1.1 GFF1.py,NONE,1.1 GFF2.py,NONE,1.1 GFF2_5.py,NONE,1.1 GFF3.py,NONE,1.1 GO_Term.py,NONE,1.1 GenbankFlatfile.py,NONE,1.1 GenericSequence.py,NONE,1.1 GeneticElement.py,NONE,1.1 Genotype.py,NONE,1.1 Germplasm_Details.py,NONE,1.1 Germplasm_List.py,NO!
NE,1.1 Global_Keyword.py,NONE,1.1 HBond_Pair.py,NONE,1.1 HFormatText.py,NONE,1.1 Haplotyping_Study_obj.py,NONE,1.1 ICIS_Query.py,NONE,1.1 ICIS_Query2.py,NONE,1.1 ICIS_Query3.py,NONE,1.1 IntAct_XML.py,NONE,1.1 Interaction.py,NONE,1.1 InteractionMethod.py,NONE,1.1 Interaction_partner.py,NONE,1.1 Interactor.py,NONE,1.1 MEME_Text.py,NONE,1.1 MGIS_ACCESSION.py,NONE,1.1 MMP_Locus.py,NONE,1.1 MO_Term_Test.py,NONE,1.1 MmCIFText.py,NONE,1.1 Multi_key_value_pair.py,NONE,1.1 MyTestingDataType_11024145298313.py,NONE,1.1 MyTree.py,NONE,1.1 NCBI_BLAST_Text.py,NONE,1.1 NCBI_Blast_XML.py,NONE,1.1 NCBI_Blast_XML_Gif.py,NONE,1.1 NCBI_Blast_XML_Gif_Map.py,NONE,1.1 NCBI_MEME_Text.py,NONE,1.1 NucleotideSequence.py,NONE,1.1 PDBFormattedText.py,NONE,1.1 PDBText.py,NONE,1.1 PDGJOB.py,NONE,1.1 PHDText.py,NONE,1.1 PMUTText.py,NONE,1.1 PSeaTextFormatted.py,NONE,1.1 PhenotypeDescription.py,NONE,1.1 PubMedMEDLINE.py,NONE,1.1 RNASequence.py,NONE,1.1 SINGER_ACCESSION.py,NONE,1.1 Sample.py,NONE,1.1 Schemat!
ikonMotifID.py,NONE,1.1 SchematikonMotifSupport.py,NONE,1.1 S!
chematikonSegmentAttributes.py,NONE,1.1 SchematikonSegmentID.py,NONE,1.1 SchematikonStructureAnnotation.py,NONE,1.1 SchematikonVorocodeName.py,NONE,1.1 Scored_acronym_string.py,NONE,1.1 SimpleAnnotatedGIFImage.py,NONE,1.1 SimpleAnnotatedJPEGImage.py,NONE,1.1 Simple_key_value_pair.py,NONE,1.1 Snp_allele.py,NONE,1.1 Snp_genotype.py,NONE,1.1 Study.py,NONE,1.1 TEST.py,NONE,1.1 TargetP_result.py,NONE,1.1 Testout.py,NONE,1.1 TextBase64.py,NONE,1.1 TextFormatted.py,NONE,1.1 TextHtml.py,NONE,1.1 TextPlain.py,NONE,1.1 TextUuencoded.py,NONE,1.1 TextXml.py,NONE,1.1 Text_plain.py,NONE,1.1 Trait_Details.py,NONE,1.1 Tree.py,NONE,1.1 TropGENE_ACCESSION.py,NONE,1.1 TropGENE_Diversity_Matrix.py,NONE,1.1 TropGENE_LOCUS.py,NONE,1.1 VirtualSequence.py,NONE,1.1 WU_BLAST_Text.py,NONE,1.1 Wildcard_Query.py,NONE,1.1 __init__.py,NONE,1.1