[MOBY-dev] Perl problems while Moby central installation

Mark Wilkinson markw at illuminae.com
Tue Jun 10 13:49:13 UTC 2008


moby01:~# more /opt/coolstack/lib/perl5/site_perl/5.8.8/SOAP/Lite.pm
# ======================================================================
#
# Copyright (C) 2000-2005 Paul Kulchenko (paulclinger at yahoo.com)
# SOAP::Lite is free software; you can redistribute it
# and/or modify it under the same terms as Perl itself.
#
# $Id: Lite.pm,v 1.43 2006/08/16 14:49:34 byrnereese Exp $
#
# ======================================================================

package SOAP::Lite;

use 5.004;
use strict;
use vars qw($VERSION);
#$VERSION = sprintf("%d.%s", map {s/_//g; $_} q$Name:  $ =~  
/-(\d+)_([\d_]+)/)
#  or warn "warning: unspecified/non-released version of ", __PACKAGE__,  
"\n";
$VERSION = '0.69';

# ======================================================================









On Tue, 10 Jun 2008 06:39:43 -0700, Andreas Groscurth  
<groscurt at mpiz-koeln.mpg.de> wrote:

> Mark Wilkinson wrote:
>> The MOBY Central at moby.ucalgary.ca is a Solaris 10 machine...
>>
>> M
>>
> so which soap lite version do you have installed ? have you ever  
> encountered such problem as i mentioned ?
>
> Andreas
>
>>
>>
>>
>> On Tue, 10 Jun 2008 01:54:53 -0700, Andreas Groscurth  
>> <groscurt at mpiz-koeln.mpg.de> wrote:
>>
>>>
>>>    Hi,
>>>    hope someone has an advice or encountered that problem before and  
>>> knows a
>>>    solution.
>>>      * I try to install a moby central. The first machine i tried is  
>>> running
>>>        Solaris 10 and it failes because of the SOAP::Lite library. All  
>>> web
>>>        service clients which uses soap are failing with
>>>
>>>      HTTP::Message content not bytes at
>>>      /usr/local/perl/lib/site_perl/SOAP/Transport/HTTP.pm line 361
>>>
>>>      we tested it with Moby and with the EBI web service clients. Has  
>>> anyone
>>>      installed a working SOAP::Lite on Solaris 10 ?
>>>
>>>      * After failing on a solaris machine we thought, a what the heck,  
>>> lets do
>>>        it on a linux machine. So i tried to install it on a 64bit  
>>> machine. This
>>>        time XML::CanonalizeXML is the problem. It aborts the make  
>>> process with
>>>        lots of lots of errors. Installing the same library on a 32bit  
>>> machine
>>>        works smoothly.
>>>
>>>      Has anyone installed a working XML::CanonalizeXML on a 64bit  
>>> machine ?
>>>
>>>    So basically,  has anyone installed a moby central on a Solaris 10  
>>> machine
>>>    or a linux 64bit and can give advices for our problems here ?
>>>    Thanks
>>>    andreas
>>> _______________________________________________
>>> MOBY-dev mailing list
>>> MOBY-dev at lists.open-bio.org
>>> http://lists.open-bio.org/mailman/listinfo/moby-dev
>>
>>
>>
>
> _______________________________________________
> MOBY-dev mailing list
> MOBY-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/moby-dev



-- 
Mark Wilkinson
Assistant Professor
Dept. of Medical Genetics, UBC
PI Bioinformatics, Heart and Lung Institute at St. Paul's Hospital
iCAPTURE Centre




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