[MOBY-dev] Problem with MobyNamespace.getNamespace
groscurt
groscurt at mpiz-koeln.mpg.de
Fri Jul 18 08:00:34 UTC 2008
Hi Paul
thanks for your effort, it does work now :)
Best
andreas
----------------original message-----------------
From: "Paul Gordon" gordonp at ucalgary.ca
To: "Core developer announcements" moby-dev at lists.open-bio.org
Date: Wed, 16 Jul 2008 14:43:02 -0600
-------------------------------------------------
> Hi Andreas,
>
> I've updated MobyNamespace to use Eddie's new caching mechanism, and it
> seems to work again. You'll ned to do a CVS update for the whole the
> moby-live/Java/src/main directory. Please let me know if you have any
> more trouble. I will be updating MobyDataType and MobyServiceType
> similarly.
>
> Regards,
>
> Paul
>
> Andreas Groscurth wrote:
>> Hi,
>>
>> I'm using the method MobyNamespace.getNamespace(String ns) in the
>> jmoby api to retrieve the MobyNamespace for a given string.
>> Unfortunately this method is not working anymore correctly. E.g. if i
>> use PMID as input (which is a namespace) i get null back from this
>> method.
>>
>> I tested it with PDB, AFAWE_ID, PMID and UniProt, which all are
>> namespaces.
>>
>> The java code I'm using is some weeks old and it worked as far as i
>> know for a long long time - why not now ?
>>
>> If i call http://biomoby.org/RESSOURCES/MOBY-S/Namespaces i get the
>> rdf in which I do find e.g. PMID... but still the method above returns
>> null.
>>
>> any ideas ?
>>
>> thx
>> andreas
>> _______________________________________________
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>> MOBY-dev at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/moby-dev
>>
>>
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