[MOBY-dev] Problems with parsing a service result

[Edward Kawas]

Hi Andreas,

Should 

new MobyDataObject( "Global_Keyword", "superman" ) );

really be

new MobyDataObject( "Global_Keyword", "keyword" ) ); ??

Eddie

> -----Original Message-----
> From: moby-dev-bounces at lists.open-bio.org 
> [mailto:moby-dev-bounces at lists.open-bio.org] On Behalf Of 
> groscurt at mpiz-koeln.mpg.de
> Sent: Wednesday, October 17, 2007 4:02 AM
> To: moby-dev at lists.open-bio.org
> Subject: [MOBY-dev] Problems with parsing a service result
> 
> Hi all,
> 
> i want to retrieve the results for the service:
> 
> get_agi_code_by_keyword/mpiz-koeln.mpg.de
> 
> it returns a collection of Descriptors for a given keyword.
> 
> Using the dashboard i retrieve a result (e.g. with keyword superman)
> 
> 
> <?xml version="1.0" encoding="UTF-8"?>
> <moby:MOBY xmlns:moby="http://www.biomoby.org/moby">
>   <moby:mobyContent>
>     <moby:mobyData moby:queryID="sip_1_">
>       <moby:Collection moby:articleName="agi_locus_code">
>         <moby:Simple>
>           <moby:Descriptor moby:id="AT3G23130"
> moby:namespace="AGI_LocusCode">
>             <moby:String moby:id="" moby:namespace=""
> moby:articleName="description">SUP (SUPERMAN); DNA binding / 
> nucleic acid binding / transcription factor/ zinc ion 
> binding</moby:String>
>           </moby:Descriptor>
>         </moby:Simple>
>       </moby:Collection>
>     </moby:mobyData>
>   </moby:mobyContent>
> </moby:MOBY>
> 
> using the simple java client
> 
> MobyService agiService = new MobyService(); 
> agiService.setCategory( "" ); agiService.setAuthority( 
> "mpiz-koeln.mpg.de" ); agiService.setName( 
> "get_agi_code_by_keyword" ); agiService = 
> central.findService( agiService )[0]; MobyRequest request = 
> new MobyRequest( central ); request.setService( agiService ); 
> request.setInput( new MobyDataObject( "Global_Keyword", 
> "superman" ) ); MobyContentInstance contentInstance = 
> request.invokeService(); MobyDataJob mobyJob = 
> contentInstance.get( 
> contentInstance.keySet().iterator().next() ); 
> MobyDataInstance[] dataInstances = mobyJob.getPrimaryData();
> 
> the dataInstance contains nothing :-(:-( (dataInstances.length = 0)
> 
> the simple java client works for other services, but fails 
> for this one...
> 
> does anybody know what is wrong ?
> 
> thanks
> andreas
> 
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