[MOBY-dev] findService java api question

Andreas Groscurth groscurt at mpiz-koeln.mpg.de
Wed Aug 8 07:45:19 UTC 2007


thanks for that.

I always thought of a simple hierarchie... so that if the requirements met for 
a service it will automatically do so for any sub datatyp (like i described 
with the getMIPSArabidopsisProteinSequence).

Thanks for helping me out :)
andreas

On Tuesday 07 August 2007 18:26, Paul Gordon wrote:
> Oops,  I just re-read the service description.  It could make sense to
> pass in an AminoAcidSequence, but, yes, it still has to be AGI-LocusCode
> namespace.
>
> > Hi Andreas,
> >
> >> ok - so if I understood it correctly
> >>
> >> I search for services consuming a GenericSequence and have as input
> >> AGI_LocusCode and return a collection...
> >>
> >> I get getMIPSArabidopsisProteinSequence
> >>
> >> If I search for services with the same parameter, but consuming an
> >> AminoAcidSequence, shouldn't I at least get the
> >> getMIPSArabidopsisProteinSequence from the previous search, if the
> >> expandObjects flag is set to true ?
> >
> > No, unless the AminoAcidSequence has the AGI_LocusCode namespace, since
> > that's what the service requires as input (any Object in the
> > AGI_LocusCode namespace).
> > Of course, if you already have the AminoAcidSequence, you probably don't
> > need to be calling that service... :-)
> >
> >> But I dont get anything for the second search....
> >>
> >> Hope one can help me again :(
> >
> > _______________________________________________
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> > http://lists.open-bio.org/mailman/listinfo/moby-dev
> >
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>
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-- 
Andreas Groscurth
Diplom Bioinformatik - PhD Student
Max Planck Institute for Plant Breeding Research
Carl-von-Linné-Weg 10
50829 Cologne
Germany
E-mail:    groscurt at mpiz-koeln.mpg.de
Phone:    +49(0)221-5062-447




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