[MOBY-dev] [MOBY-l] error when do make test
Frank Gibbons
francis_gibbons at hms.harvard.edu
Thu Feb 16 15:22:30 UTC 2006
Nicholas,
I've edited the Makefile.PL to tell you if you're missing certain modules.
I've also modified the tests, so that if you are simply missing the
database-connection modules, it explains the situation better. You might
want to do 'cvs update' in moby-live/Perl to get these changes, then do
'perl Makefile.PL PREFIX=....' and 'make test'.
Hope that helps,
-F
At 02:13 PM 2/15/2006, you wrote:
>Hello,
>
>I just downloaded the biomoby tarball from the CVS reprository
>(http://cvs.open-bio.org/cgi-bin/viewcvs/viewcvs.cgi/?cvsroot=biomoby), and
>tried to install it here to my system.
>
>So I went to moby/moby-live/Perl folder, and do "perl Makefile.PL
>PREFIX=/MyInstallationFolder".
>Then, I do make.
>
>But it seems that it's failing when i did the make test.
>I copied and pasted the error message in the bottom of this email.
>
>Do you guys can give me any clue why this happen? Maybe I miss something?
>
>I did the same thing with the latest code release version (09/16/2004)..,
>but it
>seems I can install it without this problem.
>
>
>Thanks a lot,
>Nicholas.
>
>
>alhagib 86 % make test
>PERL_DL_NONLAZY=1 /p/perl/bin/perl "-MExtUtils::Command::MM" "-e"
>"test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
>t/Central...................................# Failed test (t/Central.t at
>line 26)
># Tried to use 'MOBY::Central'.
>t/Central...................................NOK 1# Error: Can't locate
>DBD/mysql.pm in @INC (@INC contains:
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/arch
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .) at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/OntologyServer.pm
>line 70.
># BEGIN failed--compilation aborted at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/OntologyServer.pm
>line 70.
># Compilation failed in require at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/Central.pm
>line 14.
># BEGIN failed--compilation aborted at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/Central.pm
>line 14.
># Compilation failed in require at (eval 1) line 2.
># Failed test (t/Central.t at line 57)
>t/Central...................................NOK 2#
>MOBY::Central->can('Registration') failed
># MOBY::Central->can('registerObjectClass') failed
># MOBY::Central->can('_registerObjectPayload') failed
># MOBY::Central->can('deregisterObjectClass') failed
># MOBY::Central->can('_deregisterObjectPayload') failed
># MOBY::Central->can('_testObjectTypeAgainstPrimitives') failed
># MOBY::Central->can('registerServiceType') failed
># MOBY::Central->can('_registerServiceTypePayload') failed
># MOBY::Central->can('deregisterServiceType') failed
># MOBY::Central->can('_deregisterServiceTypePayload') failed
># MOBY::Central->can('retrieveNamespaces') failed
># MOBY::Central->can('_registerNamespacePayload') failed
># MOBY::Central->can('deregisterNamespace') failed
># MOBY::Central->can('_deregisterNamespacePayload') failed
># MOBY::Central->can('registerService') failed
># MOBY::Central->can('_registerServicePayload') failed
># MOBY::Central->can('_getServiceInstanceRDF') failed
># MOBY::Central->can('_registerArticles') failed
># MOBY::Central->can('deregisterService') failed
># MOBY::Central->can('_deregisterServicePayload') failed
># MOBY::Central->can('findService') failed
># MOBY::Central->can('_findServicePayload') failed
># MOBY::Central->can('_extractObjectTypes') failed
># MOBY::Central->can('registerServiceWSDL') failed
># MOBY::Central->can('_extract_ids') failed
># MOBY::Central->can('_searchForServicesWithArticle') failed
># MOBY::Central->can('_searchForSimple') failed
># MOBY::Central->can('_searchForCollection') failed
># MOBY::Central->can('_extractObjectTypesAndNamespaces') failed
># MOBY::Central->can('retrieveService') failed
># MOBY::Central->can('_retrieveServicePayload') failed
># MOBY::Central->can('retrieveResourceURLs') failed
># MOBY::Central->can('retrieveServiceProviders') failed
># MOBY::Central->can('retrieveServiceNames') failed
># MOBY::Central->can('retrieveServiceTypes') failed
># MOBY::Central->can('retrieveRelationshipTypes') failed
># MOBY::Central->can('retrieveObjectNames') failed
># MOBY::Central->can('retrieveObjectDefinition') failed
># MOBY::Central->can('retrieveNamespaces') failed
># MOBY::Central->can('retrieveObject') failed
># MOBY::Central->can('_retrieveObjectPayload') failed
># MOBY::Central->can('Relationships') failed
># MOBY::Central->can('DUMP_MySQL') failed
># MOBY::Central->can('_ISAPayload') failed
># MOBY::Central failed to implement full API
># Looks like you failed 2 tests of 2.
>t/Central...................................dubious
> Test returned status 2 (wstat 512, 0x200)
>DIED. FAILED tests 1-2
> Failed 2/2 tests, 0.00% okay
>t/Client-Central............................ok
>t/Client-CollectionArticle..................ok
>t/Client-OntologyServer.....................ok
>t/Client-Registration.......................ok
>t/Client-SecondaryArticle...................ok
>t/Client-Service............................ok
>t/Client-ServiceInstance....................ok
>t/Client-SimpleArticle......................ok
>t/CommonSubs................................ok
>t/Config....................................skipped
> all skipped: Required only for local MOBY Central
>t/CrossReference............................ok
>t/dbConnect.................................# Failed test
>(t/dbConnect.t at
>line 18)
># Tried to use 'MOBY::lsid::authority::dbConnect'.
>t/dbConnect.................................NOK 1# Error: Can't locate
>DBD/mysql.pm in @INC (@INC contains:
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/arch
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .) at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/dbConnect.pm
>line 17.
># BEGIN failed--compilation aborted at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/dbConnect.pm
>line 17.
># Compilation failed in require at (eval 1) line 2.
># Failed test (t/dbConnect.t at line 25)
># MOBY::lsid::authority::dbConnect->can('dbConnect') failed
># API not correctly implemented
>t/dbConnect.................................NOK 2# Looks like you failed 2
>tests
>of 2.
>t/dbConnect.................................dubious
> Test returned status 2 (wstat 512, 0x200)
>DIED. FAILED tests 1-2
> Failed 2/2 tests, 0.00% okay
>t/lsid-authority-ClassResolver..............# Failed test
>(t/lsid-authority-ClassResolver.t at line 18)
># Tried to use 'MOBY::lsid::authority::ClassResolver'.
>t/lsid-authority-ClassResolver..............NOK 1# Error: Can't locate
>XML/DOM.pm in @INC (@INC contains:
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/arch
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .) at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/ClassResolver.pm
>line 5.
># BEGIN failed--compilation aborted at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/ClassResolver.pm
>line 5.
># Compilation failed in require at (eval 1) line 2.
># Failed test (t/lsid-authority-ClassResolver.t at line 25)
># MOBY::lsid::authority::ClassResolver->can('resolve_classtype') failed
># Didn't implement full API
>t/lsid-authority-ClassResolver..............NOK 2# Looks like you failed 2
>tests
>of 2.
>t/lsid-authority-ClassResolver..............dubious
> Test returned status 2 (wstat 512, 0x200)
>DIED. FAILED tests 1-2
> Failed 2/2 tests, 0.00% okay
>t/lsid-authority-dbConnect..................# Failed test
>(t/lsid-authority-dbConnect.t at line 18)
>t/lsid-authority-dbConnect..................NOK 1# Tried to use
>'MOBY::lsid::authority::dbConnect'.
># Error: Can't locate DBD/mysql.pm in @INC (@INC contains:
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/arch
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .) at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/dbConnect.pm
>line 17.
># BEGIN failed--compilation aborted at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/dbConnect.pm
>line 17.
># Compilation failed in require at (eval 1) line 2.
># Looks like you failed 1 tests of 1.
>t/lsid-authority-dbConnect..................dubious
> Test returned status 1 (wstat 256, 0x100)
>DIED. FAILED test 1
> Failed 1/1 tests, 0.00% okay
>t/lsid-authority-Error......................ok
>t/lsid-authority-NamespaceResolver..........# Failed test
>(t/lsid-authority-NamespaceResolver.t at line 18)
># Tried to use 'MOBY::lsid::authority::NamespaceResolver'.
># Error: Can't locate XML/DOM.pm in @INC (@INC contains:
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/arch
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .) at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/NamespaceResolver.pm
>line 5.
>t/lsid-authority-NamespaceResolver..........NOK 1# BEGIN failed--compilation
>aborted at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/NamespaceResolver.pm
>line 5.
># Compilation failed in require at (eval 1) line 2.
># Failed test (t/lsid-authority-NamespaceResolver.t at line 25)
>#
>MOBY::lsid::authority::NamespaceResolver->can('resolve_namespacetype') failed
># NamespaceResolver didn't implement API correctly
># Looks like you failed 2 tests of 2.
>t/lsid-authority-NamespaceResolver..........dubious
> Test returned status 2 (wstat 512, 0x200)
>DIED. FAILED tests 1-2
> Failed 2/2 tests, 0.00% okay
>t/lsid-authority-PredicateResolver..........# Failed test
>(t/lsid-authority-PredicateResolver.t at line 18)
># Tried to use 'MOBY::lsid::authority::PredicateResolver'.
># Error: Can't locate XML/DOM.pm in @INC (@INC contains:
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/arch
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .) at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/PredicateResolver.pm
>line 5.
>t/lsid-authority-PredicateResolver..........NOK 1# BEGIN failed--compilation
>aborted at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/PredicateResolver.pm
>line 5.
># Compilation failed in require at (eval 1) line 2.
># Looks like you failed 1 tests of 1.
>t/lsid-authority-PredicateResolver..........dubious
> Test returned status 1 (wstat 256, 0x100)
>DIED. FAILED test 1
> Failed 1/1 tests, 0.00% okay
>t/lsid-authority-RDFConfigure...............ok
>t/lsid-authority-RelationshipResolver.......# Failed test
>(t/lsid-authority-RelationshipResolver.t at line 18)
># Tried to use 'MOBY::lsid::authority::RelationshipResolver'.
>t/lsid-authority-RelationshipResolver.......NOK 1# Error: Can't locate
>XML/DOM.pm in @INC (@INC contains:
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/arch
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .) at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/RelationshipResolver.pm
>line 5.
># BEGIN failed--compilation aborted at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/RelationshipResolver.pm
>line 5.
># Compilation failed in require at (eval 1) line 2.
># Failed test (t/lsid-authority-RelationshipResolver.t at line 25)
>#
>MOBY::lsid::authority::RelationshipResolver->can('resolve_relationshiptype')
>failed
># RelationshipResolver didn't implement full API
>t/lsid-authority-RelationshipResolver.......NOK 2# Looks like you failed 2
>tests
>of 2.
>t/lsid-authority-RelationshipResolver.......dubious
> Test returned status 2 (wstat 512, 0x200)
>DIED. FAILED tests 1-2
> Failed 2/2 tests, 0.00% okay
>t/lsid-authority-ServiceInstanceResolver....skipped
> all skipped: Skip until apparent namespace pollution fixed in
>ServiceInstanceResolver
>t/lsid-authority-ServiceResolver............# Failed test
>(t/lsid-authority-ServiceResolver.t at line 18)
># Tried to use 'MOBY::lsid::authority::ServiceResolver'.
>t/lsid-authority-ServiceResolver............NOK 1# Error: Can't locate
>XML/DOM.pm in @INC (@INC contains:
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/arch
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/perl/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .
>/p/perl-5.8.4/lib/5.8.4/sun4-solaris-thread-multi /p/perl-5.8.4/lib/5.8.4
>/p/perl-5.8.4/lib/site_perl/5.8.4/sun4-solaris-thread-multi
>/p/perl-5.8.4/lib/site_perl/5.8.4 /p/perl-5.8.4/lib/site_perl .) at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/ServiceResolver.pm
>line 5.
># BEGIN failed--compilation aborted at
>/.ulphius/p29/www-cgi/cgi-bin/nsutanto/moby/moby-live/Perl/blib/lib/MOBY/lsid/authority/ServiceResolver.pm
>line 5.
># Compilation failed in require at (eval 1) line 2.
># Looks like you failed 1 tests of 1.
>t/lsid-authority-ServiceResolver............dubious
> Test returned status 1 (wstat 256, 0x100)
>DIED. FAILED test 1
> Failed 1/1 tests, 0.00% okay
>t/Template..................................skipped
> all skipped: This is just a template
>Failed Test Stat Wstat Total Fail Failed List of
>Failed
>-------------------------------------------------------------------------------
>t/Central.t 2 512 2 2 100.00% 1-2
>t/dbConnect.t 2 512 2 2 100.00% 1-2
>t/lsid-authority-ClassResolver.t 2 512 2 2 100.00% 1-2
>t/lsid-authority-NamespaceResolve 2 512 2 2 100.00% 1-2
>t/lsid-authority-PredicateResolve 1 256 1 1 100.00% 1
>t/lsid-authority-RelationshipReso 2 512 2 2 100.00% 1-2
>t/lsid-authority-ServiceResolver. 1 256 1 1 100.00% 1
>t/lsid-authority-dbConnect.t 1 256 1 1 100.00% 1
>3 tests skipped.
>Failed 8/23 test scripts, 65.22% okay. 13/380 subtests failed, 96.58% okay.
>*** Error code 29
>make: Fatal error: Command failed for target `test_dynamic'
>
>_______________________________________________
>moby-l mailing list
>moby-l at biomoby.org
>http://biomoby.org/mailman/listinfo/moby-l
PhD, Computational Biologist,
Harvard Medical School BCMP/SGM-322, 250 Longwood Ave, Boston MA 02115, USA.
Tel: 617-432-3555 Fax:
617-432-3557 http://llama.med.harvard.edu/~fgibbons
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