[MOBY-dev] getSignatureForm down

[Yogaraj.Khanal at usd.edu]

hi is the execution of my program related to the current problem with the moby can  anyone help me?
/*
 * Moby.java
 *
 * Created on December 3, 2006, 9:33 AM
 *
 * To change this template, choose Tools | Options and locate the template under
 * the Source Creation and Management node. Right-click the template and choose
 * Open. You can then make changes to the template in the Source Editor.
 */
import org.biomoby.client.*;
import org.biomoby.shared.*;
import org.biomoby.shared.data.*;
/**
 *
 * @author yogaraj.khanal
 */
public class Moby {
    
    /** Creates a new instance of Moby */
    public Moby() {
    }
    
    /**
     * @param args the command line arguments
     */
    public static void main(String[] args) throws Exception{
        Central worker = new CentralImpl();
        MobyService templateService = new MobyService("runGeneIDGFF");
        System.out.println(templateService.getName());
         System.out.println(templateService.getUniqueName());
         System.out.println(templateService.getAuthority());
        MobyPrimaryData[] priinput=templateService.getPrimaryInputs();
        System.out.println(priinput);
        
        MobyService[] validServices = worker.findService(templateService.getId());
        System.out.println(validServices);
        MobyRequest mr = new MobyRequest(worker);
	//mr.setService(validServices[0]);
       
	//mr.setInput(new MobyDataObject("", ""));
	System.out.println(mr.invokeService().toString());

	//MobyRequest mr = new MobyRequest(worker);
	mr.setService(validServices[10]);
        
	mr.setInput(new MobyDataObject("NCBI_gi", "111076"));
        MobyDataType dataType=new MobyDataType("AminoAcidSequence");
        mr.setInput(new MobyDataObject("AminoAcidSequence"));
        MobyDataSecondaryInstance[] secondaryData=new MobyDataSecondaryInstance[5];
        MobySecondaryData p1=new MobySecondaryData("strand");
        p1.setDataType("String");
        p1.setDefaultValue("Reverse");
        MobySecondaryData p2=new MobySecondaryData("profile");
        p2.setDataType("String");
        p2.setDefaultValue("Arabidopsis thalina(weed)");
        MobySecondaryData p3=new MobySecondaryData("engine");
        p3.setDataType("String");
        p3.setDefaultValue("Exon Mode");
        MobySecondaryData p4=new MobySecondaryData("signals");
        p4.setDataType("String");
        p4.setDefaultValue("Start condons");
        MobySecondaryData p5=new MobySecondaryData("exons");
        p5.setDataType("String");
        p5.setDefaultValue("All exons");
        
        secondaryData[0]=new MobyDataSecondaryInstance(p1);
        secondaryData[1]=new MobyDataSecondaryInstance(p2);
        secondaryData[2]=new MobyDataSecondaryInstance(p3);
        secondaryData[3]=new MobyDataSecondaryInstance(p4);
        secondaryData[4]=new MobyDataSecondaryInstance(p5);
        mr.setSecondaryInput(secondaryData);
        
	System.out.println(mr.invokeService().toString());
        // TODO code application logic here
    }
    
}


----- Original Message -----
From: Edward Kawas <edward.kawas at gmail.com>
Date: Tuesday, December 12, 2006 10:25 am
Subject: Re: [MOBY-dev] getSignatureForm down

> Hi Dirk,
> 
> The page has moved to
> http://mobycentral.icapture.ubc.ca:8090/authority/forms/getSignatureForm. Where
> is that old reference?
> 
> Eddie 
> 
> > -----Original Message-----
> > From: moby-dev-bounces at lists.open-bio.org 
> > [mailto:moby-dev-bounces at lists.open-bio.org] On Behalf Of Dirk Haase
> > Sent: Tuesday, December 12, 2006 7:18 AM
> > To: Core developer announcements
> > Subject: [MOBY-dev] getSignatureForm down
> > 
> > Hi,
> > 
> > it seems that the getSignatureForm servlet
> > (http://mobycentral.icapture.ubc.ca:8090/servlets/forms/getSig
> > natureForm) is down - I think already for a couple of days now.
> > 
> > Can somebody fix that?
> > 
> > Thanks,
> > dirk
> > _______________________________________________
> > MOBY-dev mailing list
> > MOBY-dev at lists.open-bio.org
> > http://lists.open-bio.org/mailman/listinfo/moby-dev
> 
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