[MOBY-dev] Moby objects in Taverna. Where do they come from?

Edward Kawas edward.kawas at gmail.com
Tue Sep 13 13:08:20 UTC 2005


Hi,

Objects aren't hard coded. They just have to be registered
in Mobycentral.

I am not sure if you are up for it, but you could always
install the servlets (I could help you).

Eddie

> -----Original Message-----
> From: moby-dev-bounces at portal.open-bio.org [mailto:moby-
> dev-bounces at portal.open-bio.org] On Behalf Of Pieter
> Neerincx
> Sent: Tuesday, September 13, 2005 1:35 AM
> To: Core developer announcements
> Subject: Re: [MOBY-dev] Moby objects in Taverna. Where do
> they come from?
> 
> Hi Eddie,
> 
> On 12-Sep-2005, at 5:10 PM, Edward Kawas wrote:
> 
> > Hi,
> >
> > The answer basically is that you also need to set up
> some
> > servlets (RESOURCES script, types, etc), if you have a
> > custom registry.
> 
> Thanks for the quick feedback. I was already afraid it
> would be
> something like that :(.
> 
> > So Taverna is basically reading in your services, and
> cannot
> > find the objects, so it probably defaults to the
> Mobycentral
> > registry.
> 
> Would it help if I register my objects at THE central
> mobycentral
> instead of in my local central? Or are the objects
> hardcoded in some
> jar file (like lib/jmoby.jar perhaps)?
> 
> Pieter
> 
> >
> > Eddie
> >
> >
> >> -----Original Message-----
> >> From: moby-dev-bounces at portal.open-bio.org
> [mailto:moby-
> >> dev-bounces at portal.open-bio.org] On Behalf Of Pieter
> >> Neerincx
> >> Sent: Monday, September 12, 2005 8:06 AM
> >> To: Core developer announcements
> >> Subject: [MOBY-dev] Moby objects in Taverna. Where do
> they
> >> come from?
> >>
> >> Hi all,
> >>
> >> I'm having some trouble to make BioMOBY work with
> Taverna.
> >> I have a
> >> local development Moby central. When I register both
> new
> >> services and
> >> new objects I notice that only my custom services are
> >> listed in
> >> Taverna. The list of moby objects is not in sync with
> what
> >> is
> >> registered in my central. So where does Taverna get
> those
> >> objects
> >> from and how do I get my own objects in there? Does
> anyone
> >> have a clue?
> >>
> >> Cheers,
> >>
> >> Pieter
> >>
> >> Wageningen University and Research centre (WUR)
> >> Laboratory of Bioinformatics
> >> Transitorium (building 312) room 1034
> >> Dreijenlaan 3
> >> 6703 HA Wageningen
> >> The Netherlands
> >> phone: 0317-483 060
> >> fax: 0317-483 584
> >> mobile: 06-143 66 783
> >> pieter.neerincx at wur.nl
> >>
> >>
> >>
> >> _______________________________________________
> >> MOBY-dev mailing list
> >> MOBY-dev at biomoby.org
> >> http://www.biomoby.org/mailman/listinfo/moby-dev
> >>
> >
> > _______________________________________________
> > MOBY-dev mailing list
> > MOBY-dev at biomoby.org
> > http://www.biomoby.org/mailman/listinfo/moby-dev
> >
> 
> 
> Wageningen University and Research centre (WUR)
> Laboratory of Bioinformatics
> Transitorium (building 312) room 1034
> Dreijenlaan 3
> 6703 HA Wageningen
> The Netherlands
> phone: 0317-483 060
> fax: 0317-483 584
> mobile: 06-143 66 783
> pieter.neerincx at wur.nl
> 
> 
> 
> _______________________________________________
> MOBY-dev mailing list
> MOBY-dev at biomoby.org
> http://www.biomoby.org/mailman/listinfo/moby-dev




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