[moby] [MOBY-dev] How to register the service to Moby

mark wilkinson markw at illuminae.com
Thu Mar 31 22:07:36 UTC 2005


The tutorial has tons of code, and all of the services that I run have their code in the moby-live/Perl/scripts/Services/LocalServices.pm module in the cvs

That should get you started :-)

Cheers!

M

-----Original Message-----
From: Chunyan Wang <wangch at cpsc.ucalgary.ca>
Date: Thu, 31 Mar 2005 13:30:36 
To:Core developer announcements <moby-dev at portal.open-bio.org>
Subject: Re: [moby] [MOBY-dev] How to register the service to Moby

Hi Mark,
I think I just found it on Google. I will check the tutorial on the 
website that you sent to me yesterday. By the way, do you a sample of 
codes in Perl (for new API)? If you have it, could you send them to me? 
If you don't have, don't worry about it. I will find them in tutorial, I 
guess.
Thanks,
Regards,

Chunyan or Joyce

Mark Wilkinson wrote:

>Hi Chunyan, 
>
>Please tell me where you found the link to that website - I am trying to
>"squash" them all :-)  
>
>That particular tutorial, and the code modules that are described in it,
>are significantly out of date, and *will not* result in functional
>services under the new API.
>
>Please follow the tutorial on the website that I sent you yesterday.
>
>Unfortunately, MOBY Central has crashed AGAIN this morning so you will
>not be able to register your service there until it is restarted... I
>still have not found the source of these ongoing problems but the
>crashes are getting worse - I can't even log in to that machine
>anymore.  If I cannot find the source of these problems by the end of
>the week I will ask everyone to point their code at the mirror of MOBY
>Central that I am running here in Vancouver, since it seems to be more
>stable.
>
>  
>
>>>sigh<<
>>>      
>>>
>
>Cheers all
>
>M
>
>
>
>
>
>On Thu, 2005-03-31 at 10:38, Chunyan Wang wrote:
>  
>
>>Hi Mark,
>>I say "the Fasta Example Service" which is at the URL: 
>>http://plantgenome.sdsc.edu/mobyed2/Fasta_Service/.
>>I have a set of codes: Hmm_test_central.pl, HMMSearch.pm, 
>>MobyEd_dispatcher.cgi for HMM search. I have a function for registering 
>>service to Moby in the Hmm_test_central.pl.
>>I think when I run Hmm_test_central.pl, them HMM service will be 
>>registered in Moby center. But I use the command line to check it, it is 
>>not registered. I am not clear about this. Do we get any email from Moby 
>>once the service is registered?
>>Anyway, Thank you for the information. I will check the tutorial again. 
>>I guess that I may did not correct.
>>
>>Regards,
>>
>>Joyce
>>
>>Mark Wilkinson wrote:
>>
>>    
>>
>>>Hi Joyce, 
>>>
>>>When you say "the Fasta example" which example do you mean?  Can you
>>>send the URL?
>>>
>>>To answer your question - on this page:
>>>http://www.biomoby.org/tutorials.html
>>>
>>>there is a tutorial that includes information about how to register your
>>>service in MOBY Central.
>>>
>>>If you don't want to do it through code, there is also a web based GUI
>>>written by Eddie Kawas that will help you register your service - you
>>>can get to it by clicking the appropriate link from the Tools and Toys
>>>page (http://www.biomoby.org/toolstoys.html).
>>>
>>>Unfortunately, MOBY Central has just crashed... badly... and I need
>>>someone to reboot it, but it is on the other side of the continent so it
>>>might take a while until someone notices.  As such, you will have to
>>>wait for a while until you will be able to register your service.  Sorry
>>>about that!  It doesn't happen very often...
>>>
>>>Let me know if you need any more help.
>>>
>>>Cheers!
>>>
>>>Mark
>>>
>>>
>>>
>>>On Wed, 2005-03-30 at 16:04, Chunyan Wang wrote:
>>> 
>>>
>>>      
>>>
>>>>Hi All,
>>>>I am new to Moby. I followed the Fasta example service to create our 
>>>>svervice. How do I register our service to Moby Centrol? could Anyone 
>>>>let me know about?
>>>>Thanks,
>>>>
>>>>Joyce
>>>>
>>>>Mark Wilkinson wrote:
>>>>
>>>>   
>>>>
>>>>        
>>>>
>>>>>Hi all, 
>>>>>
>>>>>The LSID resolver for MOBY LSID's is up and running again thanks to
>>>>>Eddie and with help and advice from Stephen Evanchik at IBM.
>>>>>
>>>>>I've also written a little CGI form that will resolve a MOBY LSID to the
>>>>>screen for viewing.  This is available under the "Cool Tools" link from
>>>>>the MOBY homepage.
>>>>>
>>>>>Cheers all!
>>>>>
>>>>>M
>>>>>
>>>>>(reminder - just one more day to register for the MOBY meeting at a
>>>>>discount rate!!)
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>     
>>>>>
>>>>>          
>>>>>
>>>>_______________________________________________
>>>>MOBY-dev mailing list
>>>>MOBY-dev at biomoby.org
>>>>http://www.biomoby.org/mailman/listinfo/moby-dev
>>>>   
>>>>
>>>>        
>>>>
>>_______________________________________________
>>MOBY-dev mailing list
>>MOBY-dev at biomoby.org
>>http://www.biomoby.org/mailman/listinfo/moby-dev
>>    
>>

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--
Mark Wilkinson
...on the road!



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