[EMBOSS] shufflseq output redirection for multiple shuffles

Anandkumar Surendrarao aksrao at ucdavis.edu
Wed Nov 28 03:57:24 UTC 2018


Greetings!

If I have a multifasta file - lets say input.fasta with 5 chromosomal
sequences,
and I want to shuffle the entire genome 5 times,

how can I redirect each of the 5 shuffled genomes to a different filename -
output1.fasta, ... output5.fasta?

Currently, my syntax redirects all 5 shuffled versions to the same output
filename, which is not optimal. Any suggestions?

Thanks a bunch.

- Anand
_____
*Anandk*umar *S*urendra*rao*, PhD
+1.530.574.5134
+91.91760.70887
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