[EMBOSS] changing default parameter values in Jemboss

[Rozenbaum, Daniel (Biocceleration Inc)]

Dear all,

Is there a way to adjust Jemboss so that, for example, the output section option "Full USA" of all applications where it's relevant (e.g. fuzznuc) is checked by default? I was able to tweak default values of those parameters that appear in the ACD files, but what about those that are not explicitly mentioned on the ACD file?

Many thanks,
Daniel

--
Daniel Rozenbaum
Biocceleration, Inc.
OCIO/ Office of Application Engineering&   Development/ Patent System Division
600 Dulany St., Alexandria, VA 22314