[EMBOSS] Remote Genbank from NCBI?

Ed Siefker ebs15242 at creighton.edu
Fri Sep 30 18:22:00 UTC 2011


Is there a way to access NCBI Genbank remotely?
My emboss.default contains the following:

DB tgb [ type: N method: srswww format: genbank
    url: "http://cbr-rbc.nrc-cnrc.gc.ca/srs6bin/cgi-bin/wgetz"
    dbalias: genbankrelease
    fields: "sv des org key"
    comment: "Genbank IDs" ]


However that server does not exist.  I've looked on
the NCBI website for alternatives, but all I can find
is the ftp site.  I've also read the EMBOSS admin guide.
The examples there use infobiogen.fr, which is also
closed.

So what do people do for genbank access?  I'd prefer
to avoid setting up a local database myself if I can.
Is there a list of genbank mirrors around somewhere?




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