[EMBOSS] ORF selection with EMBOSS

[Jon Ison]

Hi Hervé

Nothing in EMBOSS so far as I'm aware, but if all you want is for checktrans to report the longest
ORF then that should be an easy enough option to add.

Cheers

Jon


> Hi,
> I have been using transeq and checktrans to find ORFs in DNA sequences.
> I have an question regarding the selection of the ORFs in case
> checktrans finds multiple ones in the result of transeq: I would like to
> select the longest one automatically (assuming it is the correct one).
> Is there any existing tool in EMBOSS (or alternatively in any Bio*
> library) that does this job?
> Cheers,
> Hervé
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