[EMBOSS] Antwort: tfscan output

david.bauer at bayerhealthcare.com david.bauer at bayerhealthcare.com
Tue Mar 23 11:59:16 UTC 2010


Have you considered using jaspscan ?
It uses the JASPAR database of transcription factors 
(http://jaspar.cgb.ki.se/)

David.

emboss-bounces at lists.open-bio.org schrieb am 23/03/2010 12:12:42:

> TFscan appears to be a bit of a dinosaur in EMBOSS as there is no 
> option to change the report format. It would be really nice to be 
> able to get (eg) GFF output or similar. How easy would this be to do?
> 
> ..d
> 
> 
> David Martin PhD
> College of Life Sciences
> University of Dundee 
> 01382 388704
> The University of Dundee is a Scottish Registered Charity, No. SC015096.
> 
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