[EMBOSS] emboss stand-in for fasta

[Ingo P. Korndoerfer]

could anybody help me out with what to use as a stand-in for fasta ?

fasta by itself is fine, but under windows there is no way to make fasta
accept
filenames with spaces.  neither "" nor """" nor '' seem to alleviate the
problem.

so i was hoping emboss would have something (which would also save me
having to install fasta
on all of our pcs).

what i need to do is run a sequence against an in house library and
return me
the top hit in alignment.

1000 thanks in advance

greetings

ingo

-- 
CRELUX GmbH
 
Dr. Ingo Korndoerfer
Head of Crystallography

Am Klopferspitz 19a
82152 Martinsried
Germany

Phone: +49 89 700760210
Fax: +49 89 700760222 
korndoerfer at crelux.com
www.crelux.com

Amtsgericht München HRB 165552 - Managing Directors: Dr. Michael Schäffer, Dr. Ismail Moarefi

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