[EMBOSS] Problems installing EMBASSY: /usr/local/include/ajgraph.h:29:20: plplot.h: No such file or directory
michael watson (IAH-C)
michael.watson at bbsrc.ac.uk
Mon May 11 14:12:20 UTC 2009
Hi
I am running RHEL 4 and just installed EMBOSS 6.0.1 in /usr/local/EMBOSS
I downloaded ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.67.tar.gz
and tried to install that.
I used ./configure --prefix=/usr/local/EMBOSS and then tried make. The
results are below.
Any help? What is plplot.h?
Thanks
Mick
-bash-3.00# make
Making all in src
make[1]: Entering directory `/usr/bioinfvm/PHYLIPNEW-3.67/src'
gcc -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\"
-DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE=\"PHYLIPNEW\"
-DVERSION=\"3.67\" -DSTDC_HEADER
S=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1
-DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1
-DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1
-DHAVE_DLFCN_H=1 -DHAVE_DIRENT_H=1 -DSTDC_HEADERS=1 -DHAVE_UNISTD_H=1
-DGETPGRP_VOID=1 -DHAVE_STRFTIME=1 -DHAVE_FORK=1 -DHAVE_VFORK=1
-DHAVE_WORKING_VFORK=1 -DHAVE_WORKING_
FORK=1 -DHAVE_VPRINTF=1 -DHAVE_STRDUP=1 -DHAVE_STRSTR=1 -DHAVE_STRCHR=1
-DHAVE_ERAND48=1 -DHAVE_MEMMOVE=1 -DHAVE_LIBM=1 -DPLD_png=1 -I.
-I../include -I/usr/local/EMBOSS/incl
ude -I/usr/local/EMBOSS/include/eplplot -DAJ_LinuxLF
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE
-DLENDIAN -I/usr/include//include -DNO_AUTH -O2 -MT
clique.o -MD -MP -MF .deps/clique.Tpo -c -o clique.o clique.c
In file included from /usr/local/include/emboss.h:5,
from ../include/phylip.h:30,
from clique.c:1:
/usr/local/include/ajgraph.h:29:20: plplot.h: No such file or directory
In file included from /usr/local/include/emboss.h:5,
from ../include/phylip.h:30,
from clique.c:1:
/usr/local/include/ajgraph.h:81: error: syntax error before "xx0"
/usr/local/include/ajgraph.h:82: error: syntax error before "xx0"
/usr/local/include/ajgraph.h:84: error: syntax error before "xcentre"
/usr/local/include/ajgraph.h:115: error: syntax error before "xx0"
/usr/local/include/ajgraph.h:116: error: syntax error before "xx0"
/usr/local/include/ajgraph.h:117: error: syntax error before '*' token
/usr/local/include/ajgraph.h:135: error: syntax error before "PLFLT"
/usr/local/include/ajgraph.h:146: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:147: error: syntax error before '*' token
/usr/local/include/ajgraph.h:162: error: syntax error before "PLFLT"
/usr/local/include/ajgraph.h:169: error: syntax error before "PLFLT"
/usr/local/include/ajgraph.h:170: error: syntax error before "PLFLT"
/usr/local/include/ajgraph.h:172: error: syntax error before "xx0"
/usr/local/include/ajgraph.h:173: error: syntax error before "xx0"
/usr/local/include/ajgraph.h:189: error: syntax error before "PLFLT"
/usr/local/include/ajgraph.h:191: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:192: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:193: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:194: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:196: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:198: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:200: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:203: error: syntax error before "PLFLT"
/usr/local/include/ajgraph.h:283: error: syntax error before "xcentre"
/usr/local/include/ajgraph.h:285: error: syntax error before '*' token
/usr/local/include/ajgraph.h:285: error: syntax error before "xcentre"
/usr/local/include/ajgraph.h:287: error: syntax error before "xcentre"
/usr/local/include/ajgraph.h:291: error: syntax error before "xcentre"
/usr/local/include/ajgraph.h:294: error: syntax error before
"ajGraphTextLength"
/usr/local/include/ajgraph.h:294: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:296: error: syntax error before
"ajGraphTextHeight"
/usr/local/include/ajgraph.h:296: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:297: error: syntax error before
"ajGraphDistPts"
/usr/local/include/ajgraph.h:297: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:298: error: syntax error before
"ajGraphFitTextOnLine"
/usr/local/include/ajgraph.h:298: error: syntax error before "xx1"
/usr/local/include/ajgraph.h:302: error: syntax error before "xcentre"
make[1]: *** [clique.o] Error 1
make[1]: Leaving directory `/usr/bioinfvm/PHYLIPNEW-3.67/src'
make: *** [all-recursive] Error 1
Head of Bioinformatics
Institute for Animal Health
Compton
Berks
RG20 7NN
01635 578411
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