[EMBOSS] extractfeat and "-join" option

Andres Pinzon andrespinzon at gmail.com
Mon Jun 22 14:32:52 UTC 2009


Hi everyone,
The following line, should return a single fasta file with all the CDS
in a single sequence:

 extractfeat environmental:DP000238 -type CDS -join stdout

Instead it is returning each of them as a separate entry. Am I doing
something wrong?

Best,

-- 
Andrés Pinzón
http://bioinf.ibun.unal.edu.co/~apinzon/
Bioinformatics Center, Colombia EMBnet node
http://bioinf.ibun.unal.edu.co
Tel +57 3165000 ext 16961 Fax +571 3165415
Micology and Phytopathology Laboratory - Los Andes University.
http://bioinf.uniandes.edu.co
Tel +571 3394949 ext. 2768




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