[EMBOSS] Applications limits

[Jon Ison]

Hi Achille

As a rule, the native EMBOSS applications have no arbitrary
limits so you should be able to process as many sequences as
your hardware / software setup allows.  The applications you
mention however use ports of third-party code.  These too should
have had any arbitrary limits removed but I'm not 100% on that.

You might check there are no limits on memory usage in your
system, use "unlimit" or some such on Unix.

Cheers

Jon




> Hi All !
> I'm new in the mailing list and I want to say hello to everyones
> I want to use some EMBOSS apps as services in a Taverna workflow, but
> they failed in some cases, I suppose when I use "too many" sequences or
> alignments as inputs!! Could you tell me if there are some specific limits
> and what they are?! Especially about "emma", "fproml" and "fneighbor"
> services !
> thanks
> best regards
> Achille
>
>
>
> Aiutaci TU ad aiutare TANTI: Il tuo 5 per MILLE a sostegno della nostra RICERCA.
>  Come fare:
>  Nella prossima dichiarazione dei redditi metti la firma
>  nell'apposito riquadro del 5 per mille,
>  scrivendo anche il codice fiscale dell'Istituto Nazionale per la Ricerca sul Cancro di Genova :
>   c.f. 80 100 850 108
>  Istituto Nazionale per la Ricerca sul Cancro
>  L.go R. Benzi, 10 -16132 Genova
>  http://www.istge.it
> _______________________________________________
> EMBOSS mailing list
> EMBOSS at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/emboss
>