[EMBOSS] Prettyplot options

Peter Rice pmr at ebi.ac.uk
Mon Sep 22 14:24:36 UTC 2008

simon andrews (BI) wrote:
> The nearest I got was:
> cat muscle.txt | prettyplot -graph png -nonumber -noname -consensus N
> -auto -sequences stdin -goutfile pretty.png -gdesc " " -gtitle " "
> -gsubtitle " "

Without going into details ....

-nolistoptions removes the command options at the bottom

Using two spaces for the gdesc and gtitle values removes them

-gsubtitle "  " (two spaces again) removes the date.

We will look into why two spaces were needed, and add an easier option 
to remove all text.

We will also look into generating larger PNG files for large alignments.

Hope this helps


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