[EMBOSS] seqret: warnings with refseq format

Oliver Wafzig Oliver.Wafzig at sygnis.de
Tue Oct 7 09:41:58 UTC 2008


 
Dear emboss users,

Using the following command to convert a 'RefSeq' protein file to fasta,
I get a lot of warnings about "bad Genbank LOCUS line".
	seqret -nofeature -sequence rsnc.0312.2008.gpff  -nofirstonly
-outseq fasta::stdout

I tested it with version 5.0.0 and the current stable 6.0.1 emboss
package.

Is that a known issue?

Kind regards,

Oliver
 
  





More information about the EMBOSS mailing list