[EMBOSS] emma: problem with filename : please help

Staffa, Nick (NIH/NIEHS) staffa at niehs.nih.gov
Tue May 20 14:18:50 UTC 2008


What is Debian ?


On 5/18/08 9:34 PM, "charles-listes-emboss at plessy.org"
<charles-listes-emboss at plessy.org> wrote:

> Le Wed, Apr 30, 2008 at 12:03:40PM +0100, Peter Rice a écrit :
> In emma.c the
> wrong characters are tested.
> 
> release 5.0.0:
>     if(m2c=='b')
>
>  ajStrAssignC(&m2str,"iub");
>     else if(m2c=='p')
>
>  ajStrAssignC(&m2str,"clustalw");
>     else if(m2c=='g')
>
>  ajStrAssignC(&m2str,"own");
> 
> corrected:
>     if(m2c=='i')
>
>  ajStrAssignC(&m2str,"iub");
>     else if(m2c=='c')
>
>  ajStrAssignC(&m2str,"clustalw");
>     else if(m2c=='o')
>
>  ajStrAssignC(&m2str,"own");

Thanks a lot, I have corrected this in Debian's
> emboss package through
the following
> patch:

http://svn.debian.org/wsvn/debian-med/trunk/packages/emboss/trunk/debi
> an/patches/clustalw2-fix.patch?op=file&rev=0&sc=0

Have a nice day,

--
> 
Charles Plessy
Debian-Med packaging team
Wak?, Saitama,
> Japan
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