[EMBOSS] list and label values

Sebastien Moretti Sebastien.Moretti at unil.ch
Fri Mar 28 14:18:03 UTC 2008


Hi,

I am looking for a way to use labels/alias for values in a list:

variable: matrixpath "/usr/molbio/share"

list: matrix [
         default: "$(matrixpath)/Hs.smat"
         minimum: 1
         maximum: 1
         values: "Human:$(matrixpath)/Hs.smat, 
Arabidopsis:$(matrixpath)/At.smat, Rat:$(matrixpath)/Rn.smat, 
Drosophila:$(matrixpath)/Dm.smat, Chicken:$(matrixpath)/Gga.smat, 
Mouse:$(matrixpath)/Mm.smat, Zebrafish:$(matrixpath)/Dr.smat"
         delimiter: ","
         codedelimiter: ":"
         comment: "defaults"
         prompt: "Score matrices file, species specific"
         information: "Score matrices file, species specific"
     ]


So, when I select 'Human', I would like that "$(matrixpath)/Hs.smat" 
appears in command line.


How could I do this ?
Thanks

-- 
Sébastien Moretti
SIB, Quartier Sorge - Genopode
CH-1015 Lausanne, Switzerland
Tel.: +41 (21) 692 4056/4221



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