[EMBOSS] problems installing/using TrEMBL
George Magklaras
georgios at biotek.uio.no
Mon Oct 8 08:59:56 UTC 2007
Hi Fernan,
Fernan Aguero wrote:
> George,
>
> Does the name of the resource matter? Mine is named 'embl' ...
>
If you plan to have the same values for all databases, no. But I tend to
choose different length values for different databanks, so in that case,
I have a different RES entry for each databank.
> What other options are there SWISS? GCG? GENBANK? This is AFAIK an
> EMBL formatted file. But maybe I'm wrong ...
>
I believe that TrEMBL should be formatted with the SWISS entry format in
dbxflat (-idformat SWISS).
--
--
George Magklaras
Senior Computer Systems Engineer/UNIX Systems Administrator
EMBnet Technical Management Board
The Biotechnology Centre of Oslo,
University of Oslo
http://www.biotek.uio.no/
EMBnet Norway: http://www.no.embnet.org/
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