[EMBOSS] dbigcg/dbxgcg and GCG 11
Zheng Jin Tu
ztu at msi.umn.edu
Mon Nov 5 16:53:40 UTC 2007
I am using dbigcg for indexing gcgdb for emboss use
setenv GCGDB /usr/local/db/gcgdb/current
dbigcg -idformat genbank -directory $GCGDB/gcggenbank -filename '*.seq' \
-dbname genbank -release 160 -date 09/01/07 -outfile gb_dbigcg.log &
Thanks, TU
----------------------------------------------------
On Mon, 5 Nov 2007, john walshaw (JIC) wrote:
>
> Hello,
>
> am I right in thinking that dbigcg and dbxgcg don't support GCG 11
> database formats?
>
> best wishes,
>
> Dr John Walshaw
> Department of Computational & Systems Biology
> John Innes Centre
> Norwich Research Park, Colney, Norwich NR4 7UH, UK
>
>
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