[EMBOSS] Antwort: Genbank GI fetching?

[david.bauer at bayerhealthcare.com]

Hi Niels,

Niels Larsen <niels at genomics.dk> schrieb am 18/06/2007 01:56:40:

> Btw, the seqret documentation
> doesnt say, but stdin: works as stdout:
> 
> zcat 2.gz | seqret -filter stdin:AAIY01677200 -sbegin1 11 -osformat2
> embl -firstonly

Ehm, this is a strange construction. The -filter is a general qualifier 
for all EMBOSS programs and means that input comes from stdin and output 
goes to stdout. So I'm not sure what happens if you combine -filter with 
stdin: but I guess that Peter has an answer to this.

Cheers,
David.