[EMBOSS] Can't get seqmatchall to run, please help me
nicolas roggli
Nicolas.Roggli at molbio.unige.ch
Fri Jun 1 08:28:07 UTC 2007
hello
I have this list of files that I want to process with seqmatchall.
-rw-r--r-- 1 nicolas user 3394 Jun 1 02:29 rtt109_h_puta.
-rw-r--r-- 1 nicolas user 2692 Jun 1 02:29 rtt109_h_puta_1.
-rw-r--r-- 1 nicolas user 3529 Jun 1 02:29 rtt109_h_puta_10.
-rw-r--r-- 1 nicolas user 3603 Jun 1 02:29 rtt109_h_puta_11.
-rw-r--r-- 1 nicolas user 3687 Jun 1 02:29 rtt109_h_puta_12.
-rw-r--r-- 1 nicolas user 2707 Jun 1 02:29 rtt109_h_puta_2.
-rw-r--r-- 1 nicolas user 2691 Jun 1 02:29 rtt109_h_puta_3.
-rw-r--r-- 1 nicolas user 2681 Jun 1 02:29 rtt109_h_puta_4.
-rw-r--r-- 1 nicolas user 2666 Jun 1 02:29 rtt109_h_puta_5.
-rw-r--r-- 1 nicolas user 2963 Jun 1 02:29 rtt109_h_puta_6.
-rw-r--r-- 1 nicolas user 2669 Jun 1 02:29 rtt109_h_puta_7.
-rw-r--r-- 1 nicolas user 2966 Jun 1 02:29 rtt109_h_puta_8.
-rw-r--r-- 1 nicolas user 3817 Jun 1 02:29 rtt109_h_puta_9.
I do this
% seqmatchall
All-against-all comparison of a set of sequences
Input sequence set: rtt109_h_puta*
Segmentation fault (core dumped)
this is the core
-rw-r--r-- 1 nicolas user 2490368 Jun 1 03:15 core
What I am doing wrong? What is the segmentation fault?
Thanks for any help
nicolas
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