[EMBOSS] help with Profit
Perdeep.Mehta at STJUDE.ORG
Fri Jul 27 22:13:27 UTC 2007
I am trying to search swissprot protein database with the "Profit"
program. Somehow after running for a while Profit produces following out
put that has no data in it. Here is the text in the generated output
# PROF scan using Henikoff profile pdz_henikoff.prf
# Scores >= threshold 75 (max score 88.53)
Does any one have a clue what's wrong with it? I checked the
installation of swissprot database it works fine I could fetch a
sequence out with seqret.
Thanks in advance for any help.
Hartwell Center for Bioinformatics & Biotechnology
St. Jude Children's Research Hospital
Memphis, TN 38105-2794
Tel: 901-495 3774
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