[EMBOSS] relative abundance/word bias application
Simon Andrews
simon.andrews at bbsrc.ac.uk
Fri Jul 27 08:24:19 UTC 2007
On 26 Jul 2007, at 17:44, Eliot Bush wrote:
> hello,
>
> I'm wondering if people have any interest in including in EMBOSS an
> application to calculate the relative abundance/bias of words.
>
> I've been working on some code
> which is able calculate this measure up to 10 or 11 bp words in
> reasonable amounts of time. If there is interest, I would be happy to
> contribute it.
Yes, I was just discussing doing this kind of analysis yesterday.
We'd certainly appreciate code in EMBOSS which could do this kind of
calculation.
Cheers
Simon.
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