[EMBOSS] dreg and reverse strand

Peter Rice pmr at ebi.ac.uk
Tue Feb 20 16:56:28 UTC 2007


Andres Pinzon wrote:
> Hi,
> Im using dreg to find some patterns on a xanthomonas* genome reverse strand.
> This is the command im using:
> 
>  dreg -sequence ./campestrisVesicatoria.gb -pattern
> 'TTC(G|T|C){14,17}TTC(G|A|T)' -outfile campestrisVes-rev.dreg.gb
> -rformat3 genbank -sask1

Oops. Can you send me the input sequence please. We will fix it for the next 
release (soon)

regards,

Peter



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