[EMBOSS] EMBOSS database queries

Peter Rice pmr at ebi.ac.uk
Wed Dec 12 16:20:31 UTC 2007


Michael Thon wrote:
> Thanks Peter, I got it working.
> While I'm at it, a couple more questions popped up:
> 1) do you know if  these indexes compatible with the Bio::DB::Registry 
> type databases?

No ... well, we could add Bio::DB indices to the things EMBOSS can 
retrieve, then they would be :-)

> 2) Is there any way to index and search sequence features?

Not at present - but:

2a. what would you like to search for ...
2b. what would you like as the result ...
   2b.i. if you want features, what do we call them?

regards,

Peter



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