[EMBOSS] EMBOSS database queries

Peter Rice pmr at ebi.ac.uk
Wed Dec 12 16:20:31 UTC 2007

Michael Thon wrote:
> Thanks Peter, I got it working.
> While I'm at it, a couple more questions popped up:
> 1) do you know if  these indexes compatible with the Bio::DB::Registry 
> type databases?

No ... well, we could add Bio::DB indices to the things EMBOSS can 
retrieve, then they would be :-)

> 2) Is there any way to index and search sequence features?

Not at present - but:

2a. what would you like to search for ...
2b. what would you like as the result ...
   2b.i. if you want features, what do we call them?



More information about the EMBOSS mailing list