[EMBOSS] seqret error
Peter Rice
pmr at ebi.ac.uk
Sun Aug 5 15:31:24 UTC 2007
Guido Vacano wrote:
> Hello--
>
> I'm getting an error as follows:
>
> -------
> $ seqret nt:EF348590
> Reads and writes (returns) sequences
>
> EMBOSS An error in ajindex.c at line 2424:
> GetKeys: No keys in node
> --------
>
> The nt database is a FASTA file from NCBI, and I used dbxfasta.
Does the database have accession numbers? There should be a count in the
*.pxac file from the dbxfasta run.
If you run seqret with -debug and send the seqret.dbg file to
emboss-bug at emboss.open-bio.org it will help to trace the problem.
regards,
Peter
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