[EMBOSS] Problem indexing PDB fasta file
Enrique de Andres Saiz
enrique.deandres at pcm.uam.es
Thu Mar 30 15:46:30 UTC 2006
Hello,
I'm trying to index the fasta file of the PDB database with dbifasta
command and I get a lot of warnings as:
Warning: Duplicate ID skipped: '1FNT_A' All hits will point to first ID
found
I have been looking the PDB fasta file and I see that, for the previous
warning, there are an entry whoose id is '1FNT_A' and another one whoose
id is '1FNT_a'. Then, this make me think that EMBOSS is
case-insensitive. Is this true? Are there any way to distinguish between
the two id's?
Thanks in advance,
Enrique.
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