[EMBOSS] Oddcomp behaves oddly ...

[Jon Ison]

Hi Marc

What might be cleaner is if we modify the ACD file so that any window
size bigger than the sequence length is reprompted for.

Also, to add a qualifier to set the window to the sequence length, if
that'd help.

Cheers

Jon



>> Basically what is happening is that there is a check for the
>> length of the sequence being shorter than the window.  It may
>> well be this that is giving the problem.
>
> This was a perfect diagnosis. It works fine when I make the window size
> off one.
> But I guess it should not be a problem for oddcomp being the window size
> equal (or even larger) to the length of the sequence ? It is a way of
> saying: don't bother with window sizes, just take the complete thing.
> Could be a nice to have feature.
> Thanks David,
> Marc
>
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