[EMBOSS] install EMBOSS-3.0.0 on Intel Mac

haruosuz at yahoo.co.jp haruosuz at yahoo.co.jp
Mon Jun 5 00:23:30 UTC 2006


Dear Sir,

[1]
http://lists.open-bio.org/pipermail/emboss/2006-May/002531.html
Although I read README and applied all the fixes from:
   ftp://emboss.open-bio.org/pub/EMBOSS/fixes/
I failed to install.

% make

*snip*

ajindex.c: In function 'ajBtreeCacheNewC':
ajindex.c:200: error: storage size of 'buf' isn't known
ajindex.c: In function 'ajBtreeSecCacheNewC':
ajindex.c:8234: error: storage size of 'buf' isn't known
make[1]: *** [ajindex.lo] Error 1
make: *** [all-recursive] Error 1

[2]
http://lists.open-bio.org/pipermail/emboss/2006-May/002532.html
I also used fink to install EMBOSS on my Mac, but I failed to install.

% fink install emboss

*snip*

dpkg: error processing /sw/fink/dists/unstable/main/binary-darwin- 
i386/graphics/libjpeg_6b-16_darwin-i386.deb (--install):
package architecture (darwin-i386) does not match system (darwin- 
powerpc)
dpkg: error processing /sw/fink/dists/unstable/main/binary-darwin- 
i386/graphics/libjpeg-bin_6b-16_darwin-i386.deb (--install):
package architecture (darwin-i386) does not match system (darwin- 
powerpc)
Errors were encountered while processing:
/sw/fink/dists/unstable/main/binary-darwin-i386/graphics/ 
libjpeg_6b-16_darwin-i386.deb
/sw/fink/dists/unstable/main/binary-darwin-i386/graphics/libjpeg- 
bin_6b-16_darwin-i386.deb
### execution of dpkg failed, exit code 1
Failed: can't batch-install packages: /sw/fink/dists/unstable/main/ 
binary-darwin-i386/graphics/libjpeg_6b-16_darwin-i386.deb /sw/fink/ 
dists/unstable/main/binary-darwin-i386/graphics/libjpeg- 
bin_6b-16_darwin-i386.deb

[About my Mac]
Mac OS X 10.4.6
Darwin 8.6.1
MacBookPro1,1
Intel Core Duo


I am looking forward to hearing from you.

Sincerely yours,

Haruo Suzuki




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