[EMBOSS] Antwort: "entret", "seqret", & "whichdb" don't work

haruosuz at yahoo.co.jp haruosuz at yahoo.co.jp
Fri Jul 14 00:18:37 UTC 2006


Thank you very much.

The commands successfully work after I edited .embossrc as follows:
set emboss_acdroot /usr/local/share/EMBOSS/acd
were replaced by
set emboss_tempdata /usr/local/share/EMBOSS/test

(example)

$whichdb -showall
Search all databases for an entry
ID or Accession number: hsfau1
Output file [outfile.whichdb]: stdout
# Trying 'twp:hsfau1'
# Failed 'twp:hsfau1'
# Trying 'tsw:hsfau1'
# Failed 'tsw:hsfau1'
# Trying 'tgenbank:hsfau1'
tgenbank:hsfau1
# Trying 'tpir:hsfau1'
# Failed 'tpir:hsfau1'
# Trying 'tswnew:hsfau1'
# Failed 'tswnew:hsfau1'
# Trying 'tembl:hsfau1'
tembl:hsfau1
# Trying 'tgb:hsfau1'
# Failed 'tgb:hsfau1'

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