[EMBOSS] Building EMBOSS in cygwin - undefined reference to _c_pl...

David States dstates at bioinformatics.med.umich.edu
Fri Feb 17 21:00:19 UTC 2006


I am trying to build EMBOSS-3.0.0 under cygwin (recent install) and follow the directions in http://emboss.sourceforge.net/download/cygwin.html, but when I get to ./libs/ajgraph.o, the build fails with a large number of error messages of the form

.libs/ajgraph.o:ajgraph.c:(.text+0xc4): undefined reference to `_c_plxsfnam'
.libs/ajgraph.o:ajgraph.c:(.text+0x15d): undefined reference to `_c_pladv'
.libs/ajgraph.o:ajgraph.c:(.text+0x195): undefined reference to `_c_plssub'
...

Any suggestions?

David

David J. States, M.D., Ph.D.
Professor of Human Genetics
University of Michigan School of Medicine 
Palmer Commons,  2035B
100 Washtenaw Rd.
Ann Arbor, MI 48109 USA
email: dstates at umich.edu
tel: (734) 615-5510
fax: (734) 615-6553
URL: http://stateslab.bioinformatics.med.umich.edu






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