[EMBOSS] EMBOSS database configurartion......

[Richard Rothery]

Hi All,

 

How does one configuire EMBOSS to retrieve sequences directly from
swissprot/trembl? Specifically what lines have to be added to the
database configuration file? Something that links to the EXPASY site?
The idea here is to use SEQRET to grab the sequences. I have no room on
my system for the entire database, indexing etc...

 

Hopefully, the answer to this one will be simple!!

 

Thanks,

 

Richard

 

###############################################

CIHR Membrane Protein Research Group,

Department of Biochemistry, University of Alberta,

Edmonton T6G 2H7

Ph. (780) 492-2229 Fax. (780) 492-0886

###############################################

 

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.open-bio.org/pipermail/emboss/attachments/20050526/aad5f4f8/attachment-0001.html>