[EMBOSS] cannot compile a single program

Mon Feb 23 14:52:52 UTC 2004

Dear list,

I'm trying to add a program to our EMBOSS-2.6.0 installation.
These are the steps I followed:
- added clustal.c into EMBOSS_distro/emboss dir and clustal.acd under 
EMBOSS_distro/emboss/acd
- then edited EMBOSS_distro/emboss/Makefile.am and added 'clustal' to the 
'bin_PROGRAMS' section and the line 'clustal_SOURCES = clustal.c' to the same 
Makefile.am
- when doing a 'make clustal' into EMBOSS_distro/emboss dir I get this

> # make clustal
> cd .. && /bin/sh ./config.status emboss/Makefile depfiles
> config.status: creating emboss/Makefile
> config.status: executing depfiles commands
> Makefile:2179: aaindexextract.Po: No such file or directory
> Makefile:2180: abiview.Po: No such file or directory
> Makefile:2181: acdc.Po: No such file or directory
> Makefile:2182: ajtest.Po: No such file or directory
> Makefile:2183: antigenic.Po: No such file or directory
> Makefile:2184: backtranseq.Po: No such file or directory
> Makefile:2185: banana.Po: No such file or directory
> Makefile:2186: biosed.Po: No such file or directory
> Makefile:2187: btwisted.Po: No such file or directory
> Makefile:2188: cai.Po: No such file or directory
> Makefile:2189: chaos.Po: No such file or directory
> Makefile:2190: charge.Po: No such file or directory
> Makefile:2191: checktrans.Po: No such file or directory
> Makefile:2192: chips.Po: No such file or directory
> Makefile:2193: cirdna.Po: No such file or directory
> Makefile:2194: clustal.Po: No such file or directory
> Makefile:2195: codcmp.Po: No such file or directory
> Makefile:2196: coderet.Po: No such file or directory
> Makefile:2197: complex.Po: No such file or directory
> Makefile:2198: compseq.Po: No such file or directory
> Makefile:2199: cons.Po: No such file or directory
> Makefile:2200: corbatest.Po: No such file or directory
> Makefile:2201: cpgplot.Po: No such file or directory
> Makefile:2202: cpgreport.Po: No such file or directory
> Makefile:2203: cusp.Po: No such file or directory
> Makefile:2204: cutgextract.Po: No such file or directory
> Makefile:2205: cutseq.Po: No such file or directory
> Makefile:2206: dan.Po: No such file or directory
> Makefile:2207: dbiblast.Po: No such file or directory
> Makefile:2208: dbifasta.Po: No such file or directory
> Makefile:2209: dbiflat.Po: No such file or directory
> Makefile:2210: dbigcg.Po: No such file or directory
> Makefile:2211: degapseq.Po: No such file or directory
> Makefile:2212: demoalign.Po: No such file or directory
> Makefile:2213: demofeatures.Po: No such file or directory
> Makefile:2214: demolist.Po: No such file or directory
> Makefile:2215: demoreport.Po: No such file or directory
> Makefile:2216: demosequence.Po: No such file or directory
> Makefile:2217: demostring.Po: No such file or directory
> Makefile:2218: demotable.Po: No such file or directory
> Makefile:2219: descseq.Po: No such file or directory
> Makefile:2220: diffseq.Po: No such file or directory
> Makefile:2221: digest.Po: No such file or directory
> Makefile:2222: distmat.Po: No such file or directory
> Makefile:2223: dotmatcher.Po: No such file or directory
> Makefile:2224: dotpath.Po: No such file or directory
> Makefile:2225: dottup.Po: No such file or directory
> Makefile:2226: dreg.Po: No such file or directory
> Makefile:2227: einverted.Po: No such file or directory
> Makefile:2228: embossdata.Po: No such file or directory
> Makefile:2229: embossversion.Po: No such file or directory
> Makefile:2230: emma.Po: No such file or directory
> Makefile:2231: emowse.Po: No such file or directory
> Makefile:2232: entrails.Po: No such file or directory
> Makefile:2233: entret.Po: No such file or directory
> Makefile:2234: eprimer3.Po: No such file or directory
> Makefile:2235: equicktandem.Po: No such file or directory
> Makefile:2236: est2genome.Po: No such file or directory
> Makefile:2237: etandem.Po: No such file or directory
> Makefile:2238: extractfeat.Po: No such file or directory
> Makefile:2239: extractseq.Po: No such file or directory
> Makefile:2240: findkm.Po: No such file or directory
> Makefile:2241: freak.Po: No such file or directory
> Makefile:2242: fuzznuc.Po: No such file or directory
> Makefile:2243: fuzzpro.Po: No such file or directory
> Makefile:2244: fuzztran.Po: No such file or directory
> Makefile:2245: garnier.Po: No such file or directory
> Makefile:2246: geecee.Po: No such file or directory
> Makefile:2247: getorf.Po: No such file or directory
> Makefile:2248: helixturnhelix.Po: No such file or directory
> Makefile:2249: histogramtest.Po: No such file or directory
> Makefile:2250: hmoment.Po: No such file or directory
> Makefile:2251: iep.Po: No such file or directory
> Makefile:2252: infoalign.Po: No such file or directory
> Makefile:2253: infoseq.Po: No such file or directory
> Makefile:2254: intconv.Po: No such file or directory
> Makefile:2255: isochore.Po: No such file or directory
> Makefile:2256: jembossctl.Po: No such file or directory
> Makefile:2257: lindna.Po: No such file or directory
> Makefile:2258: listor.Po: No such file or directory
> Makefile:2259: marscan.Po: No such file or directory
> Makefile:2260: maskfeat.Po: No such file or directory
> Makefile:2261: maskseq.Po: No such file or directory
> Makefile:2262: matcher.Po: No such file or directory
> Makefile:2263: megamerger.Po: No such file or directory
> Makefile:2264: merger.Po: No such file or directory
> Makefile:2265: msbar.Po: No such file or directory
> Makefile:2266: mwcontam.Po: No such file or directory
> Makefile:2267: mwfilter.Po: No such file or directory
> Makefile:2268: needle.Po: No such file or directory
> Makefile:2269: newcpgreport.Po: No such file or directory
> Makefile:2270: newcpgseek.Po: No such file or directory
> Makefile:2271: newseq.Po: No such file or directory
> Makefile:2272: noreturn.Po: No such file or directory
> Makefile:2273: notseq.Po: No such file or directory
> Makefile:2274: nthseq.Po: No such file or directory
> Makefile:2275: octanol.Po: No such file or directory
> Makefile:2276: oddcomp.Po: No such file or directory
> Makefile:2277: palindrome.Po: No such file or directory
> Makefile:2278: pasteseq.Po: No such file or directory
> Makefile:2279: patmatdb.Po: No such file or directory
> Makefile:2280: patmatmotifs.Po: No such file or directory
> Makefile:2281: patmattest.Po: No such file or directory
> Makefile:2282: pepcoil.Po: No such file or directory
> Makefile:2283: pepinfo.Po: No such file or directory
> Makefile:2284: pepnet.Po: No such file or directory
> Makefile:2285: pepstats.Po: No such file or directory
> Makefile:2286: pepwheel.Po: No such file or directory
> Makefile:2287: pepwindow.Po: No such file or directory
> Makefile:2288: pepwindowall.Po: No such file or directory
> Makefile:2289: pestfind.Po: No such file or directory
> Makefile:2290: plotcon.Po: No such file or directory
> Makefile:2291: plotorf.Po: No such file or directory
> Makefile:2292: polydot.Po: No such file or directory
> Makefile:2293: preg.Po: No such file or directory
> Makefile:2294: prettyplot.Po: No such file or directory
> Makefile:2295: prettyseq.Po: No such file or directory
> Makefile:2296: prima.Po: No such file or directory
> Makefile:2297: primers.Po: No such file or directory
> Makefile:2298: primersearch.Po: No such file or directory
> Makefile:2299: printsextract.Po: No such file or directory
> Makefile:2300: profit.Po: No such file or directory
> Makefile:2301: prophecy.Po: No such file or directory
> Makefile:2302: prophet.Po: No such file or directory
> Makefile:2303: prosextract.Po: No such file or directory
> Makefile:2304: pscan.Po: No such file or directory
> Makefile:2305: rebaseextract.Po: No such file or directory
> Makefile:2306: recoder.Po: No such file or directory
> Makefile:2307: redata.Po: No such file or directory
> Makefile:2308: remap.Po: No such file or directory
> Makefile:2309: restover.Po: No such file or directory
> Makefile:2310: restrict.Po: No such file or directory
> Makefile:2311: revseq.Po: No such file or directory
> Makefile:2312: seealso.Po: No such file or directory
> Makefile:2313: seqinfo.Po: No such file or directory
> Makefile:2314: seqmatchall.Po: No such file or directory
> Makefile:2315: seqret.Po: No such file or directory
> Makefile:2316: seqretall.Po: No such file or directory
> Makefile:2317: seqretallfeat.Po: No such file or directory
> Makefile:2318: seqretset.Po: No such file or directory
> Makefile:2319: seqretsingle.Po: No such file or directory
> Makefile:2320: seqretsplit.Po: No such file or directory
> Makefile:2321: showalign.Po: No such file or directory
> Makefile:2322: showdb.Po: No such file or directory
> Makefile:2323: showfeat.Po: No such file or directory
> Makefile:2324: showorf.Po: No such file or directory
> Makefile:2325: showseq.Po: No such file or directory
> Makefile:2326: shuffleseq.Po: No such file or directory
> Makefile:2327: sigcleave.Po: No such file or directory
> Makefile:2328: silent.Po: No such file or directory
> Makefile:2329: sirna.Po: No such file or directory
> Makefile:2330: sixpack.Po: No such file or directory
> Makefile:2331: skipseq.Po: No such file or directory
> Makefile:2332: splitter.Po: No such file or directory
> Makefile:2333: stretcher.Po: No such file or directory
> Makefile:2334: stssearch.Po: No such file or directory
> Makefile:2335: supermatcher.Po: No such file or directory
> Makefile:2336: syco.Po: No such file or directory
> Makefile:2337: testplot.Po: No such file or directory
> Makefile:2338: textsearch.Po: No such file or directory
> Makefile:2339: tfextract.Po: No such file or directory
> Makefile:2340: tfm.Po: No such file or directory
> Makefile:2341: tfscan.Po: No such file or directory
> Makefile:2342: tmap.Po: No such file or directory
> Makefile:2343: tranalign.Po: No such file or directory
> Makefile:2344: transeq.Po: No such file or directory
> Makefile:2345: treetypedisplay.Po: No such file or directory
> Makefile:2346: trimest.Po: No such file or directory
> Makefile:2347: trimseq.Po: No such file or directory
> Makefile:2348: twofeat.Po: No such file or directory
> Makefile:2349: union.Po: No such file or directory
> Makefile:2350: vectorstrip.Po: No such file or directory
> Makefile:2351: water.Po: No such file or directory
> Makefile:2352: whichdb.Po: No such file or directory
> Makefile:2353: wobble.Po: No such file or directory
> Makefile:2354: wordcount.Po: No such file or directory
> Makefile:2355: wordmatch.Po: No such file or directory
> Makefile:2356: wossname.Po: No such file or directory
> Makefile:2357: yank.Po: No such file or directory
> make: *** No rule to make target `yank.Po'.  Stop.
> #

What am I missing?

Regards,

martin

-- 
Martín Sarachu
mad at biol.unlp.edu.ar
EMBNet Argentina
http://www.ar.embnet.org