Hello,
I don't know if you could help me with the little problem I have.
I have installed your EMBOSS-GUI application on our server a few month ago. And
it works great.
Since I have installed SRS on our servern. I have mofified the emboss.default in
order to use to the SRS indexes.
Now it looks like :
DB TREMBL [
methodquery: srs
format: SWISS
type: P
comment: "TREMBL (SPTREMBL + TREMBLNEW) using SRS"
app: getz
dbalias: TREMBL
methodall: direct
file: "trembl.dat"
dir: $emboss_data_dir/swall
]
And that works quitr well on command line, when I need to retrieve a sequence with seqret for example.
But if I am using the EMBOSS-GUI interface I just obtain the following errror message:
EMBOSS An error in ajfile.c at line 145: execvp ('getz -e '[TREMBL-id:Q977L9]'', NULL) failed: 'No such file or directory' Error:
Unable to read sequence 'TREMBL-id:Q977L9' Died: seqret terminated: Bad value for '-sequence' with -auto defined seqret exited with
status 1...
Do you have a clue for the problem ?
Thanks in advance
Best regards.
Yann-François BIZOUERNE
BioInformatic Team
BAYER CropScience
1, rue Pierre Fontaine
91058 Evry Cedex
FRANCE
Phone: 33-(0) 1-69-47-61-56
FAX: 33-(0) 1-69-47-61-42
E-mail: yann-francois.bizouerne at bayercropscience.com
Intranet: http://bioinfo.evry.fr.bayercropscience/