est2genome complains that stack ran out of memory

[Chan Chee Seng]

Hi all,
 
I have recently installed emboss version 2.6.  When my one of my users
ran estgenome, she got the following error messages.
 
~> est2genome
Align EST and genomic DNA sequences
EST sequence(s): park2musdowngene.txt
Genomic sequence: park2mousecontig.txt
Output file [mus.est2genome]: hope7.estgenome
Error: rpairs 2500001 beyond maximum 2500000
Error: increase space threshold to repeat this search
Error: stack ran out of memory, returning NULL
Error: rpairs 2500001 beyond maximum 2500000
.........
 
Is there a configuration file to tweak so as to increase the stack?  Do
I have to recompile emboss with some special settings?  Any help would
be most appreciated.  Thanks.
 
Regards,
Chan Chee Seng
UNIX administrator
Genome Institute of Singapore
1 Science Park Road
The Capricorn #05-01
Singapore 117528
Web : http://www.gis.a-star.edu.sg <http://www.gis.a-star.edu.sg/> 
 
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