entret bug or feature ?

Marc Logghe Marc.Logghe at devgen.com
Tue Apr 29 10:27:39 UTC 2003


Hi all,
Thanks to Simon Andrews I had a new toy to play with: entret.
And I have already a question about that: why is a seqret returning
something and entret not. 
I tried the following with a local ipi database, which is actually a blast
database:
seqret ipi:ENSP00000289136 -debug
and 
entret ipi:ENSP00000289136 -debug
Like I mentioned I don't get anything back from entret. Why is that ? I'll
include both debug files
 <<seqret.dbg>>  <<entret.dbg>> 
In emboss.default the ipi database is defined as:
DB ipi [
   type: P
   format: ncbi
   method: app
   app: "fastacmd -d ipi -s %s"
]
Thanks,
ML

***********************************************************
Marc Logghe, Ph.D.
Senior Scientist
Scientific Computing Group
deVGen
Technologiepark 9
9052 Zwijnaarde
Belgium
tel: +32 (0) 9 324 24 88
fax: +32 (0) 9 324 24 25
***********************************************************

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