Extracting protein translation with extractfeat
Gary Williams, Tel 01223 494522
gwilliam at hgmp.mrc.ac.uk
Tue Apr 29 08:22:44 UTC 2003
Try using 'coderet -nocds -nomrna'.
Burke Squires wrote:
> I would like to extract the protein translation for genes in a Genbank file.
> I need the name to also be extracted so I must use extractfeat but I am not
> sure what of the myriad of option to put together to get the amino acid
> sequence out with the name. The Example lists a mod_res but nothing else.
> Got any ideas?
> Burke Squires
> MacroGenics, Inc.
> Dallas, TX
Gary Williams Tel: +44 1223 494522 Fax: +44 1223 494512
mailto:G.Williams at rfcgr.mrc.ac.uk http://www.rfcgr.mrc.ac.uk/
Bioinformatics, MRC RFCGR, Hinxton, Cambridge, CB10 1SB, UK
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