question about prophecy
Guy Bottu
gbottu at ben.vub.ac.be
Mon Oct 21 08:34:46 UTC 2002
from : BEN
Dear colleagues,
I was looking at what the program prophecy is doing and I am puzzled. What is
the difference between Gribskov and Henikoff profiles ? Both seem to have
match/mismatch scores computed with the help of a scoring matrix as well as gap
penalties. Furthermore, I thought that the Henikoff's made the Blocks databank
using pprofiles without gaps. Can someone help me ?
Guy Bottu
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